RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PPP1R3BQ86XI6 285 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 PDSS2Q86YH6 399 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 FAM9CQ8IZT9 166 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 TMEM132CQ8N3T6 1108 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 ZCCHC7Q8N3Z6 543 aaKnown RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 ARHGEF39Q8N4T4 335 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 CPSF7Q8N684 471 aaKnown RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 KRTCAP2Q8N6L1 136 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 FITM2Q8N6M3 262 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 OR5T3Q8NGG3 340 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 OR9I1Q8NGQ6 314 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 MMABQ96EY8 250 aaPredicted RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 C11orf24Q96F05 449 aaPredicted RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 EGLN2Q96KS0 407 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 ZBTB18Q99592 522 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 CCDC106Q9BWC9 280 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 ACTR5Q9H9F9 607 aaPredicted RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 MYNNQ9NPC7 610 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 TXLNGQ9NUQ3 528 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 LYARQ9NX58 379 aaKnown RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 SLC39A1Q9NY26 324 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 ZIM2Q9NZV7 527 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 DHCR7Q9UBM7 475 aaKnown RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 PISDQ9UG56 409 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 GVINP1Q7Z2Y8 2422 aa9.89□□□□□ -0.83
TPM1-221ENST00000559831 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
TPM1-221ENST00000559831 FRYLO94915 3013 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 NUP210LQ5VU65 1888 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CCDC187A0A096LP49 1063 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 FAM149AA5PLN7 773 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CCT8L1PA6NM43 557 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 NR5A2O00482 541 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 DSCR3O14972 297 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 FOXS1O43638 330 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 DNAJB6O75190 326 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 PRKRAO75569 313 aaKnown RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 SCRG1O75711 98 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 DKK1O94907 266 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 SCELO95171 688 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 KCNK5O95279 499 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 TIAF1O95411 115 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 JMJD7P0C870 316 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 FGF5P12034 268 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 COX7A2P14406 83 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 ETV5P41161 510 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 ALDH9A1P49189 494 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CLNS1AP54105 237 aaKnown RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 EMP3P54852 163 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 LIM2P55344 173 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CLDN8P56748 225 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 TRA2BP62995 288 aaKnown RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 IRX1P78414 480 aaPredicted RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 RUNX2Q13950 521 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 YOD1Q5VVQ6 348 aaPredicted RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 PWWP2BQ6NUJ5 590 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CLNKQ7Z7G1 428 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 TREML1Q86YW5 311 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 MMP21Q8N119 569 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 BMPERQ8N8U9 685 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 TM4SF18Q96CE8 201 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CLIP3Q96DZ5 547 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 LIN37Q96GY3 246 aaPredicted RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 TEX37Q96LM6 180 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 MAPKAP1Q9BPZ7 522 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 YIPF2Q9BWQ6 316 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 MRGBPQ9NV56 204 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 TEX10Q9NXF1 929 aaPredicted RBP9.88□□□□□ -0.83
TPM1-221ENST00000559831 CCDC167Q9P0B6 97 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 HCN3Q9P1Z3 774 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 SRPK3Q9UPE1 567 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 MAU2Q9Y6X3 613 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 CCDC88CQ9P219 2028 aa9.88□□□□□ -0.83
TPM1-221ENST00000559831 SEC16AO15027 2179 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 A0A1B0GX78 115 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 PMS2P1A4D2B8 440 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 B4E171 279 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 EBAG9O00559 213 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 ANKRD28O15084 1053 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SCAMP2O15127 329 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 CHST10O43529 356 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 RRP9O43818 475 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 GUCY1B2O75343 617 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 NSA2O95478 260 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 AIFM1O95831 613 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 NTRK1P04629 796 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 CD1EP15812 388 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 PRPS1L1P21108 318 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 FBLP22087 321 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 CPN2P22792 545 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 JAK1P23458 1154 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 IL12AP29459 219 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 TSPAN7P41732 249 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 OR1D4P47884 311 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 MRPL19P49406 292 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 POLR2JP52435 117 aaKnown RBP9.87□□□□□ -0.83
TPM1-221ENST00000559831 KCNK10P57789 538 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 SHC2P98077 582 aa9.87□□□□□ -0.83
TPM1-221ENST00000559831 MAT1AQ00266 395 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms