RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 VWA7Q9Y334 891 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 KCNE2Q9Y6J6 123 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 ZANQ9Y493 2812 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 NRDCO43847 1150 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 CDC40O60508 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
TPM1-220ENST00000559556 TUBB4AP04350 444 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 IVDP26440 423 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 CHRNB4P30926 498 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 HNRNPH1P31943 449 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 HNMTP50135 292 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 SSR4P51571 173 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 HSD17B7P56937 341 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 STXBP1P61764 594 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 RBBP5Q15291 538 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 EMC4Q5J8M3 183 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 STEAP4Q687X5 459 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 TRMT10BQ6PF06 316 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 KLHDC8AQ8IYD2 350 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 PSD4Q8NDX1 1056 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 TTLQ8NG68 377 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 NCLNQ969V3 563 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 OSBPL9Q96SU4 736 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 WDR83Q9BRX9 315 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 ADAP2Q9NPF8 381 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 TIMMDC1Q9NPL8 285 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 FBXW2Q9UKT8 454 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 YARS2Q9Y2Z4 477 aaKnown RBP12.19□□□□□ -0.46
TPM1-220ENST00000559556 OARD1Q9Y530 152 aa12.19□□□□□ -0.46
TPM1-220ENST00000559556 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 SYNDIG1LA6NDD5 238 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 TMEM200CA6NKL6 621 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CDC7O00311 574 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CES2O00748 559 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 PRKNO60260 465 aaPredicted RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 GNAZP19086 355 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 GSTM2P28161 218 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 MSX1P28360 303 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 PPP2R1BP30154 601 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 SLC6A12P48065 614 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 HNRNPFP52597 415 aaKnown RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 RAB38P57729 211 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 GPR85P60893 370 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 BTN3A2P78410 334 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 RUNX2Q13950 521 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 FRG1Q14331 258 aaKnown RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 ADAMTSL2Q86TH1 951 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 GPALPP1Q8IXQ4 340 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 ZNF595Q8IYB9 648 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 TMEM52Q8NDY8 209 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 OR52N2Q8NGI0 321 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 LILRB4Q8NHJ6 448 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 LRRC39Q96DD0 335 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 MS4A6EQ96DS6 147 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CFAP36Q96G28 342 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 SEC16BQ96JE7 1060 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 FAR2Q96K12 515 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 PRTFDC1Q9NRG1 225 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 DEPPQ9NTK1 212 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 KCMF1Q9P0J7 381 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 CHMP2BQ9UQN3 213 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 MRPS33Q9Y291 106 aaKnown RBP12.18□□□□□ -0.46
TPM1-220ENST00000559556 TEX264Q9Y6I9 313 aa12.18□□□□□ -0.46
TPM1-220ENST00000559556 A0A088AWK7 358 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 A0A0G2JN53 185 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 LRIT2A6NDA9 550 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 A8MVJ9 347 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 ERI3O43414 337 aaKnown RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 TOXO94900 526 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 TBX6O95947 436 aaPredicted RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 C1GALT1C1LP0DN25 315 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 ZNF10P21506 573 aaPredicted RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 ELK3P41970 407 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 SLC13A2Q13183 592 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 MORF4L2Q15014 288 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 ELAVL1Q15717 326 aaKnown RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 ADPRMQ3LIE5 342 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 TMIGD1Q6UXZ0 262 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 ZC3HC1Q86WB0 502 aaKnown RBP12.17□□□□□ -0.46
TPM1-220ENST00000559556 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 RPRMLQ8N4K4 120 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 OR2L5Q8NG80 312 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 OR2M7Q8NG81 312 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 RND1Q92730 232 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 QRFPRQ96P65 431 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 EGFL8Q99944 293 aa12.17□□□□□ -0.46
TPM1-220ENST00000559556 PITHD1Q9GZP4 211 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms