RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 AP5B1Q2VPB7 878 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 UGT3A2Q3SY77 523 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 BROXQ5VW32 411 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 ATG16L1Q676U5 607 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 OR4C11Q6IEV9 310 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 NUDT13Q86X67 352 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 CA13Q8N1Q1 262 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 ZCCHC7Q8N3Z6 543 aaKnown RBP20.49■□□□□ 0.87
SNX1-206ENST00000559389 ZNF781Q8N8C0 355 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 ACOT4Q8N9L9 421 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 OR2Y1Q8NGV0 311 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 TWIST2Q8WVJ9 160 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 TUBB1Q9H4B7 451 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 MANSC1Q9H8J5 431 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 NMRK1Q9NWW6 199 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.49■□□□□ 0.87
SNX1-206ENST00000559389 PTGDR2Q9Y5Y4 395 aa20.49■□□□□ 0.87
SNX1-206ENST00000559389 SCN3AQ9NY46 2000 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 A0A0A6YYD5 115 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 EFSO43281 561 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 ZGLP1P0C6A0 271 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 ITPKBP27987 946 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 FOLR3P41439 243 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 XCR1P46094 333 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 HMGCS1Q01581 520 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 RUNX2Q13950 521 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 VWA2Q5GFL6 755 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 FAM69BQ5VUD6 431 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 TMEM151BQ8IW70 566 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 KIRREL3Q8IZU9 778 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 METTL4Q8N3J2 472 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 MIEF2Q96C03 454 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 PEX11GQ96HA9 241 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 OR1F2PQ96R84 312 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 YIPF2Q9BWQ6 316 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 RBCK1Q9BYM8 510 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 ILKAPQ9H0C8 392 aaPredicted RBP20.48■□□□□ 0.87
SNX1-206ENST00000559389 DDX31Q9H8H2 851 aaKnown RBP20.48■□□□□ 0.87
SNX1-206ENST00000559389 THAP1Q9NVV9 213 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 VPS29Q9UBQ0 182 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 PTRH2Q9Y3E5 179 aaKnown RBP20.48■□□□□ 0.87
SNX1-206ENST00000559389 CCL27Q9Y4X3 112 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 WDFY3Q8IZQ1 3526 aa20.48■□□□□ 0.87
SNX1-206ENST00000559389 EEDO75530 441 aaKnown RBP20.47■□□□□ 0.87
SNX1-206ENST00000559389 CREG1O75629 220 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 BMP10O95393 424 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 UMODP07911 640 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 RNH1P13489 461 aaKnown RBP20.47■□□□□ 0.87
SNX1-206ENST00000559389 IL10P22301 178 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 UCNP55089 124 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 OCRLQ01968 901 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 IL10RAQ13651 578 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 COMMD6Q7Z4G1 85 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 DYDC1Q8WWB3 177 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 ZNF75CPQ92670 426 aaPredicted RBP20.47■□□□□ 0.87
SNX1-206ENST00000559389 SOX17Q9H6I2 414 aaPredicted RBP20.47■□□□□ 0.87
SNX1-206ENST00000559389 LYRM4Q9HD34 91 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 AHSPQ9NZD4 102 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 ADAM29Q9UKF5 820 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 DAPP1Q9UN19 280 aa20.47■□□□□ 0.87
SNX1-206ENST00000559389 FRYQ5TBA9 3013 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 SRRM3A6NNA2 597 aaPredicted RBP20.46■□□□□ 0.87
SNX1-206ENST00000559389 ZNF891A8MT65 544 aaPredicted RBP20.46■□□□□ 0.87
SNX1-206ENST00000559389 NPIPB8E9PQR5 432 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 PIP5K1BO14986 540 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 JRKO75564 520 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 RSL1D1O76021 490 aaKnown RBP20.46■□□□□ 0.87
SNX1-206ENST00000559389 LIM2P55344 173 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 RAB38P57729 211 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 KLC1Q07866 573 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 IMPG1Q17R60 797 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 XKR7Q5GH72 579 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 SHISA6Q6ZSJ9 500 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 PRSS58Q8IYP2 241 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 ARFGAP2Q8N6H7 521 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 C1orf52Q8N6N3 182 aaKnown RBP20.46■□□□□ 0.87
SNX1-206ENST00000559389 ADAMTS18Q8TE60 1221 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 CHTF18Q8WVB6 975 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 TBC1D20Q96BZ9 403 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 LANCL2Q9NS86 450 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 FREM2Q5SZK8 3169 aa20.46■□□□□ 0.87
SNX1-206ENST00000559389 ACACAQ13085 2346 aa20.45■□□□□ 0.87
SNX1-206ENST00000559389 SLC28A1O00337 649 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 TMPRSS11DO60235 418 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 SKAP2O75563 359 aaPredicted RBP20.45■□□□□ 0.86
SNX1-206ENST00000559389 RECKO95980 971 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 PRPH2P23942 346 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 TPP2P29144 1249 aaPredicted RBP20.45■□□□□ 0.86
SNX1-206ENST00000559389 RPL14P50914 215 aaKnown RBP20.45■□□□□ 0.86
SNX1-206ENST00000559389 TMPRSS3P57727 454 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 CRTC2Q53ET0 693 aaPredicted RBP20.45■□□□□ 0.86
SNX1-206ENST00000559389 SPIN4Q56A73 249 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 MRM1Q6IN84 353 aaKnown RBP20.45■□□□□ 0.86
SNX1-206ENST00000559389 CCDC81Q6ZN84 652 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 MED25Q71SY5 747 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 PAGE2Q7Z2X7 111 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 DDIASQ8IXT1 998 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 OR2T11Q8NH01 316 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 LRRC8CQ8TDW0 803 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 C11orf24Q96F05 449 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms