RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 FCHO1O14526 889 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF500O60304 480 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 CDH16O75309 829 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 SEC24DO94855 1032 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SUPT7LO94864 414 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 SORBS2O94875 1100 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SIX3O95343 332 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SLU7O95391 586 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 MLYCDO95822 493 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 IFNA16P05015 189 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 TUBBP07437 444 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 GSTA1P08263 222 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FAM153BP0C7A2 387 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 SMIM10L1P0DMW3 83 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 COX7A2P14406 83 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 TNNI3P19429 210 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CD22P20273 847 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 MAOAP21397 527 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HIST1H1TP22492 207 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 CPN2P22792 545 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ATP5F1P24539 256 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 PPP2R1BP30154 601 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HNRNPH1P31943 449 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 GMPRP36959 345 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 BUD31P41223 144 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 MAGEA12P43365 314 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 SLCO1A2P46721 670 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CLCN2P51788 898 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ARFIP1P53367 373 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 LIM2P55344 173 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 RAB38P57729 211 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 NAA20P61599 178 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HERVK_113P63132 956 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 OLR1P78380 273 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 RHAGQ02094 409 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF33BQ06732 778 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HYAL2Q12891 473 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 BIKQ13323 160 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CUL3Q13618 768 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 DDX39BQ13838 428 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SERTAD2Q14140 314 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 E2F2Q14209 437 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ELOAQ14241 798 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF169Q14929 603 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 PCOLCEQ15113 449 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 TERF2Q15554 542 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 MEP1AQ16819 746 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ADPRMQ3LIE5 342 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CCDC153Q494R4 210 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FAM153CQ494X1 144 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 TECRLQ5HYJ1 363 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CFAP157Q5JU67 520 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 DEPDC1Q5TB30 811 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FRG2Q64ET8 278 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 B3GNTL1Q67FW5 361 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 OR4C11Q6IEV9 310 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ABHD17CQ6PCB6 329 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 CYP20A1Q6UW02 462 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 IGFL2Q6UWQ7 119 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 Q6ZS92 163 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 LANCL3Q6ZV70 420 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 PAGE2Q7Z2X7 111 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 MILR1Q7Z6M3 343 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ANKRD37Q7Z713 158 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HOMEZQ8IX15 550 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF595Q8IYB9 648 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 LAS2Q8IYD9 372 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CA13Q8N1Q1 262 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 PLD6Q8N2A8 252 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SIRT6Q8N6T7 355 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 RBMXL3Q8N7X1 1067 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 PTGR2Q8N8N7 351 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 ACOT4Q8N9L9 421 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FAM47BQ8NA70 645 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 HUS1BQ8NHY5 278 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 BRIX1Q8TDN6 353 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF473Q8WTR7 871 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 HAS2Q92819 552 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 DAZLQ92904 295 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 RGMAQ96B86 450 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 RBM18Q96H35 190 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SMIM10Q96HG1 83 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 IMMP1LQ96LU5 166 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ZNF354BQ96LW1 612 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 GPR78Q96P69 363 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FRG2BQ96QU4 278 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 F2RL3Q96RI0 385 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 MTERF1Q99551 399 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 SERPINI1Q99574 410 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 NTMT1Q9BV86 223 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ERVK-6Q9BXR3 956 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 IQCGQ9H095 443 aaKnown RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 RNF32Q9H0A6 362 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 KLHL31Q9H511 634 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 WDR41Q9HAD4 459 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 KCNK13Q9HB14 408 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 LYRM4Q9HD34 91 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 MMP25Q9NPA2 562 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms