RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CCDC187A0A096LP49 1063 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 A1L4Q6 167 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SLC9B1P1A6NJY1 282 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 E7EVH7 732 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 DNALI1O14645 258 aaPredicted RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 MGST3O14880 152 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 NKX2-8O15522 239 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ZSCAN12O43309 604 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 DUX1O43812 170 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 RRP9O43818 475 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 RASAL1O95294 804 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 C9P02748 559 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 PYGLP06737 847 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 EBLN1P0CF75 366 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ERVK-10P10266 1014 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 THRAP10827 490 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 AMD1P17707 334 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 TPSB2P20231 275 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 CCKBRP32239 447 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 GRIA3P42263 894 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 MAGEA3P43357 314 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 MAGEA6P43360 314 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 RPL21P46778 160 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 STT3AP46977 705 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 NPY2RP49146 381 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 PRLHRP49683 370 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 CLCN2P51788 898 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 COL10A1Q03692 680 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 DMPKQ09013 629 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 HSPA14Q0VDF9 509 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 BIRC2Q13490 618 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ITGA9Q13797 1035 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 LY6DQ14210 128 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 FASTKQ14296 549 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 TPSAB1Q15661 275 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 LINC00303Q3SY05 128 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 BCL7AQ4VC05 210 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ACSBG2Q5FVE4 666 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 RNASEH2BQ5TBB1 312 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 CACHD1Q5VU97 1274 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 FAM219BQ5XKK7 198 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 PDPK2PQ6A1A2 396 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 IRGCQ6NXR0 463 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 TMEM207Q6UWW9 146 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 WASH2PQ6VEQ5 465 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 RNF44Q7L0R7 432 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 PEG10Q86TG7 708 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 TMEM135Q86UB9 458 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SLC9B2Q86UD5 537 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ADGRF3Q8IZF5 1079 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 TXLNBQ8N3L3 684 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 EXD3Q8N9H8 876 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 OR4D9Q8NGE8 314 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 OR52E1Q8NGJ3 308 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 OR10G6Q8NH81 332 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 DNAJB14Q8TBM8 379 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ELMO1Q92556 727 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 GRAMD1AQ96CP6 724 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 CXorf40BQ96DE9 158 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 LINC00615Q96LM1 132 aaPredicted RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 C9orf72Q96LT7 481 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SERPINB12Q96P63 405 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ALS2CR12Q96Q35 445 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 KRT12Q99456 494 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SPRTNQ9H040 489 aaPredicted RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 DPH5Q9H2P9 285 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 WASH6PQ9NQA3 447 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 FBXO6Q9NRD1 293 aaPredicted RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 SMYD2Q9NRG4 433 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 IARS2Q9NSE4 1012 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 STARD5Q9NSY2 213 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SMOXQ9NWM0 555 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 HRASLS2Q9NWW9 162 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SLC39A1Q9NY26 324 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 DKK4Q9UBT3 224 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 IL17BQ9UHF5 180 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 SLC24A2Q9UI40 661 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 ICKQ9UPZ9 632 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 TDRKHQ9Y2W6 561 aaKnown RBP4.08□□□□□ -1.76
SPG11-211ENST00000558561 IGSF10Q6WRI0 2623 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 PIEZO2Q9H5I5 2752 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 KIR2DS5A0A0G2JLQ3 304 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 A0A0G2JNG1 304 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 C17orf113A0A1B0GUU1 675 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 HEATR9A2RTY3 570 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 SDR42E2A6NKP2 422 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 K7EM74 188 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 KIR2DS3K7RE56 304 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PGRMC1O00264 195 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 RAD51CO43502 376 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 RGS10O43665 173 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 KIF5CO60282 957 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 PPFIA2O75334 1257 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 GPC4O75487 556 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 TCEA3O75764 348 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 FAM155BO75949 473 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 STATHP02808 62 aa4.07□□□□□ -1.76
SPG11-211ENST00000558561 ANXA2P07355 339 aaKnown RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 IL6RP08887 468 aaPredicted RBP4.07□□□□□ -1.76
SPG11-211ENST00000558561 CDK4P11802 303 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms