RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 EHD3Q9NZN3 535 aa11.78□□□□□ -0.52
TPM1-209ENST00000558072 POLR3HQ9Y535 204 aaPredicted RBP11.78□□□□□ -0.52
TPM1-209ENST00000558072 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
TPM1-209ENST00000558072 MDC1Q14676 2089 aaKnown RBP11.77□□□□□ -0.52
TPM1-209ENST00000558072 PCNX2A6NKB5 2137 aa11.77□□□□□ -0.52
TPM1-209ENST00000558072 A0A0A6YYD5 115 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 C1orf226A1L170 272 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 FAM234BA2RU67 622 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 EFCAB7A8K855 629 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 SAP18O00422 153 aaKnown RBP11.77□□□□□ -0.53
TPM1-209ENST00000558072 DSCR3O14972 297 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 CFLARO15519 480 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 HCRTR1O43613 425 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
TPM1-209ENST00000558072 TBX19O60806 448 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 FAM58BPP0C7Q3 252 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 JMJD7P0C870 316 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 SDC1P18827 310 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 RAB8AP61006 207 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 SF3A3Q12874 501 aaKnown RBP eCLIP11.77□□□□□ -0.539e-9■■■■□ 23.4
TPM1-209ENST00000558072 SLAMF1Q13291 335 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 KCNAB1Q14722 419 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 GPR19Q15760 415 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 HKDC1Q2TB90 917 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 DCAF12Q5T6F0 453 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 ANXA8L1Q5VT79 327 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 ADNP2Q6IQ32 1131 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 RHBDD2Q6NTF9 364 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 GPR180Q86V85 440 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 TMEM126BQ8IUX1 230 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 WDR36Q8NI36 951 aaKnown RBP11.77□□□□□ -0.53
TPM1-209ENST00000558072 C16orf78Q8WTQ4 265 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 TESCQ96BS2 214 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 ERP27Q96DN0 273 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 C1orf50Q9BV19 199 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 DDA1Q9BW61 102 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 FAM117AQ9C073 453 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 MIEF1Q9NQG6 463 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 GIMAP4Q9NUV9 329 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 SIDT1Q9NXL6 827 aaKnown RBP11.77□□□□□ -0.53
TPM1-209ENST00000558072 NDE1Q9NXR1 346 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.53
TPM1-209ENST00000558072 ZNF292O60281 2723 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 GVINP1Q7Z2Y8 2422 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 A0A1B0GX78 115 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 CLDN4O14493 209 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 P2RX6O15547 441 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 CPNE3O75131 537 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 SH3BGRLO75368 114 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 CSO75390 466 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 SCRG1O75711 98 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 KIAA0754O94854 1291 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 KLHL18O94889 574 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 KCNK5O95279 499 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 KLK3P07288 261 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 SNRPB2P08579 225 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 ALDOCP09972 364 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 RNH1P13489 461 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 AGXTP21549 392 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 GPX3P22352 226 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 POLR2JP52435 117 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 DIO3P55073 304 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 KLC1Q07866 573 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 C2orf80Q0P641 193 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 KLF10Q13118 480 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 AGKQ53H12 422 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 COQ5Q5HYK3 327 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 HES3Q5TGS1 186 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 TMEM198Q66K66 360 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 MRM1Q6IN84 353 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 UBE3DQ7Z6J8 389 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 RNF175Q8N4F7 328 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 OR1L3Q8NH93 324 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 LRFN5Q96NI6 719 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 TAAR9Q96RI9 348 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 CCDC106Q9BWC9 280 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 SPRTNQ9H040 489 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 KLHL31Q9H511 634 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 ZNF385DQ9H6B1 395 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 REEP4Q9H6H4 257 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 ACTR5Q9H9F9 607 aaPredicted RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 SLC39A1Q9NY26 324 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 DLL3Q9NYJ7 618 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 DAPP1Q9UN19 280 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 G3BP2Q9UN86 482 aaKnown RBP11.76□□□□□ -0.53
TPM1-209ENST00000558072 NDUFAF1Q9Y375 327 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 NAALAD2Q9Y3Q0 740 aa11.76□□□□□ -0.53
TPM1-209ENST00000558072 LOXL2Q9Y4K0 774 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms