RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ECSITQ9BQ95 431 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 BHLHE41Q9C0J9 482 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 S100A14Q9HCY8 104 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 ANKMY1Q9P2S6 941 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 KLHL3Q9UH77 587 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 MAPRE3Q9UPY8 281 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 CABIN1Q9Y6J0 2220 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 CROCCQ5TZA2 2017 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 GLOD5A6NK44 160 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 EPHA8P29322 1005 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 RXRGP48443 463 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 EEFSECP57772 596 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 RNF44Q7L0R7 432 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 DHFR2Q86XF0 187 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 NT5CQ8TCD5 201 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 PNPT1Q8TCS8 783 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 UTP15Q8TED0 518 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 RERGQ96A58 199 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 CCDC115Q96NT0 180 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 TBCDQ9BTW9 1192 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 ATAD3AQ9NVI7 634 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 FBXW2Q9UKT8 454 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 MRPS2Q9Y399 296 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 CSNK1G3Q9Y6M4 447 aa19.39■□□□□ 0.69
SNRPA1-205ENST00000558036 C6orf47O95873 294 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 LMNAP02545 664 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 VSX2P58304 361 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 HBA1P69905 142 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 SLC9A5Q14940 896 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 DEFB134Q4QY38 66 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 NDUFAF5Q5TEU4 345 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 Q8N9G6 341 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 C19orf47Q8N9M1 422 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 VPS37AQ8NEZ2 397 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 OR4A15Q8NGL6 344 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 ZC3H10Q96K80 434 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 ZNF583Q96ND8 569 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 CPPED1Q9BRF8 314 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 ATG4BQ9Y4P1 393 aa19.38■□□□□ 0.69
SNRPA1-205ENST00000558036 TNRC6BQ9UPQ9 1833 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 RNASET2O00584 256 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 TRPC1P48995 793 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 TRAP1Q12931 704 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 GAB1Q13480 694 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 SIM2Q14190 667 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 HEPACAMQ14CZ8 416 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 AMZ1Q400G9 498 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 ANXA8L1Q5VT79 327 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 SPPL2CQ8IUH8 684 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 DNAJB8Q8NHS0 232 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 GAL3ST3Q96A11 431 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 A0A1B0GTQ1 180 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 ARPC2O15144 300 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 FKBP9O95302 570 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 BAG2O95816 211 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 RPL3P39023 403 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 RNF111Q6ZNA4 994 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 SHISA5Q8N114 240 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 EXOSC8Q96B26 276 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 MTERF3Q96E29 417 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 KAT8Q9H7Z6 458 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 SLAMF7Q9NQ25 335 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 BTNL2Q9UIR0 455 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 ASB4Q9Y574 426 aa19.37■□□□□ 0.69
SNRPA1-205ENST00000558036 A0A1W2PR48 441 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 H3BNX3 289 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 DNAJB6O75190 326 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 SP9P0CG40 484 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 ENGP17813 658 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 AP2B1P63010 937 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 PRSS41Q7RTY9 318 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 ZNF551Q7Z340 670 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 FAM47BQ8NA70 645 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 CAMKVQ8NCB2 501 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 SRFBP1Q8NEF9 429 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 GAREM1Q9H706 876 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 COPS7BQ9H9Q2 264 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 STX18Q9P2W9 335 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 ZNF860A6NHJ4 632 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 CLIC1O00299 241 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 NUDT21O43809 227 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 FKBP6O75344 327 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 ANPEPP15144 967 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 BNIP2Q12982 314 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 ANGPT1Q15389 498 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 C18orf63Q68DL7 685 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 CSNK1A1LQ8N752 337 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 SAP25Q8TEE9 199 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 AHCYL2Q96HN2 611 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 RSRC1Q96IZ7 334 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 CCDC3Q9BQI4 270 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 SMOC1Q9H4F8 434 aa19.36■□□□□ 0.69
SNRPA1-205ENST00000558036 PI4KAP42356 2102 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 IGHV5-51A0A0C4DH38 117 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 A0A1W2PRB8 838 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 PGRMC2O15173 223 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 EPN2O95208 641 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 GLB1P16278 677 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 IL1RNP18510 177 aa19.35■□□□□ 0.69
SNRPA1-205ENST00000558036 CASP9P55211 416 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms