RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CHRNB4P30926 498 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 HNRNPH1P31943 449 aaKnown RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 AHRP35869 848 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 SOX3P41225 446 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 GDF5P43026 501 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 SSR4P51571 173 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 IL2P60568 153 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 TRMT10BQ6PF06 316 aaKnown RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 NXPE4Q6UWF7 544 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 EID3Q8N140 333 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 PSD4Q8NDX1 1056 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 TRIM58Q8NG06 486 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 CERS2Q96G23 380 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 CSF3RQ99062 836 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 A8MVJ9 347 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF354AO60765 605 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-210ENST00000557431 CELA3AP09093 270 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 DNAJA1P31689 397 aaKnown RBP13.09□□□□□ -0.31
SLIRP-210ENST00000557431 GPR143P51810 404 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 IST1P53990 364 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 AP1S2P56377 157 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 PPIAP62937 165 aaKnown RBP13.09□□□□□ -0.31
SLIRP-210ENST00000557431 SKP1P63208 163 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 CCZ1BP86790 482 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-210ENST00000557431 MYBPHQ13203 477 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 BBS9Q3SYG4 887 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 GXYLT1Q4G148 440 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 TMEM211Q6ICI0 200 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF585AQ6P3V2 769 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 STRA8Q7Z7C7 330 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 SCUBE1Q8IWY4 988 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ARMC10Q8N2F6 343 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 TBC1D19Q8N5T2 526 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 OR2M7Q8NG81 312 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 OR10Q1Q8NGQ4 319 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ASB5Q8WWX0 329 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 WDR83Q9BRX9 315 aaKnown RBP13.09□□□□□ -0.31
SLIRP-210ENST00000557431 TRIM54Q9BYV2 358 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 TTTY12Q9BZ98 90 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 LIME1Q9H400 295 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 PELI2Q9HAT8 420 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 KCNJ16Q9NPI9 418 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 HPF1Q9NWY4 346 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
SLIRP-210ENST00000557431 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
SLIRP-210ENST00000557431 TUBB4AP04350 444 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 CERS1P27544 350 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 MAGEA5P43359 124 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 DNASE1L1P49184 302 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 RAB38P57729 211 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 SLC13A2Q13183 592 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 SLBPQ14493 270 aaKnown RBP eCLIP13.08□□□□□ -0.32
SLIRP-210ENST00000557431 CYP1B1Q16678 543 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 PPP1R3AQ16821 1122 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 SPANXN3Q5MJ09 141 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 TRPV3Q8NET8 790 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 ASB15Q8WXK1 588 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 SMC6Q96SB8 1091 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 EGFL8Q99944 293 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 CCDC77Q9BR77 488 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 TIMMDC1Q9NPL8 285 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-210ENST00000557431 MMACHCQ9Y4U1 282 aa13.08□□□□□ -0.32
SLIRP-210ENST00000557431 URADA6NGE7 173 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 WDR47O94967 919 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 TBX6O95947 436 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 IFNA16P05015 189 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 SERPINA6P08185 405 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 HOXD4P09016 255 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-210ENST00000557431 HK2P52789 917 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 PLA2G16P53816 162 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 DLX5P56178 289 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 ID2Q02363 134 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 FAM45BPQ6NSW5 357 aa13.07□□□□□ -0.32
SLIRP-210ENST00000557431 VN1R5Q7Z5H4 357 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms