RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 OR4D2P58180 307 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 IFT88Q13099 833 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 EXT1Q16394 746 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 BTBD16Q32M84 506 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 CRB2Q5IJ48 1285 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 JMJD6Q6NYC1 403 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 QSOX2Q6ZRP7 698 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 ANKRD37Q7Z713 158 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 SLC22A9Q8IVM8 553 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 CYP4X1Q8N118 509 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 CA13Q8N1Q1 262 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 CCDC63Q8NA47 563 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 F2RL3Q96RI0 385 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 TBCDQ9BTW9 1192 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 MS4A8Q9BY19 250 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 PRDM9Q9NQV7 894 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 PCTPQ9UKL6 214 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 MMACHCQ9Y4U1 282 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 V9GYY5 206 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 A0A1W2PQ72 361 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 LRRC14BA6NHZ5 514 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TTLL8A6PVC2 850 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 A8MT66 165 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 H0YIV9 168 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 DNAJB6O75190 326 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TGFB1P01137 390 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SHBGP04278 402 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PRR35P0CG20 571 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ATP5F1P24539 256 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 CERS1P27544 350 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 CCT5P48643 541 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 RAB38P57729 211 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TAS2R50P59544 299 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 RHAGQ02094 409 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TLE1Q04724 770 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 E2F2Q14209 437 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PCOLCEQ15113 449 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ADPRMQ3LIE5 342 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SFT2D3Q587I9 215 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 KHDRBS2Q5VWX1 349 aaKnown RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ADNP2Q6IQ32 1131 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 WDR93Q6P2C0 686 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PAPD4Q6PIY7 484 aaKnown RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 MILR1Q7Z6M3 343 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 TDRPQ86YL5 185 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 RIBC1Q8N443 379 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PLPP5Q8NEB5 264 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 HUS1BQ8NHY5 278 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 EPS8L3Q8TE67 593 aaKnown RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF473Q8WTR7 871 aaKnown RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 RGMAQ96B86 450 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 CCDC126Q96EE4 140 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 CNDP1Q96KN2 507 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 MTERF1Q99551 399 aaKnown RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 EPN3Q9H201 632 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ELOVL6Q9H5J4 265 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF552Q9H707 407 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-207ENST00000556831 LANCL2Q9NS86 450 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 ABI3Q9P2A4 366 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 PTGFRNQ9P2B2 879 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 STK38LQ9Y2H1 464 aa13.26□□□□□ -0.29
SLIRP-207ENST00000556831 FBN3Q75N90 2809 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 IGHV3-20A0A0C4DH32 117 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 C4orf51C9J302 202 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 SAP18O00422 153 aaKnown RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 COPEO14579 308 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 SUPT7LO94864 414 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 MYL2P10916 166 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 PTX3P26022 381 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 TSFMP43897 325 aaKnown RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 HERVK_113P63132 956 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 ARG2P78540 354 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
SLIRP-207ENST00000556831 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 NADK2Q4G0N4 442 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 ABHD17BQ5VST6 288 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 LINC00696Q6ZRV3 163 aa13.25□□□□□ -0.29
SLIRP-207ENST00000556831 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms