RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SLBPQ14493 270 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 RPE65Q16518 533 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PIGGQ5H8A4 983 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 TMEM164Q5U3C3 297 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 C1QL3Q5VWW1 255 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 IL22RA1Q8N6P7 574 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ARL10Q8N8L6 244 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 TEX19Q8NA77 164 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 CXorf40BQ96DE9 158 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 NPAS2Q99743 824 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 MENTQ9BUN1 341 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 LRRC61Q9BV99 259 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 B3GNT4Q9C0J1 378 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 LRRN3Q9H3W5 708 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 FARSBQ9NSD9 589 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 IMP3Q9NV31 184 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 AHSPQ9NZD4 102 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 TP53TG5Q9Y2B4 290 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 WBP11Q9Y2W2 641 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PRAMEF4O60810 478 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 SEMA3DO95025 777 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 BCKDHAP12694 445 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 F3P13726 295 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 CAPN3P20807 821 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PRPS1L1P21108 318 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ARFIP1P53367 373 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 UFM1P61960 85 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 HMGCS1Q01581 520 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PRAMEF9Q5VWM5 478 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 GALNT18Q6P9A2 607 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 FAM129CQ86XR2 697 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PHACTR4Q8IZ21 702 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 LIX1Q8N485 282 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 GPBAR1Q8TDU6 330 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 ASB9Q96DX5 294 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PDXPQ96GD0 296 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 GPATCH1Q9BRR8 931 aaKnown RBP13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 CENPKQ9BS16 269 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 RHBGQ9H310 441 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 RMND5AQ9H871 391 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
TRAPPC6B-206ENST00000556765 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.23
TRAPPC6B-206ENST00000556765 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 WIPF3A6NGB9 483 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PRKAR1AP10644 381 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PCNAP12004 261 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PTX3P26022 381 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 GRK3P35626 688 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ACTR1BP42025 376 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ACTR1AP61163 376 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 AP2B1P63010 937 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 REEP5Q00765 189 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SRSF11Q05519 484 aaKnown RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PRDX1Q06830 199 aaKnown RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 BNIP2Q12982 314 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TSTA3Q13630 321 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NFYCQ13952 458 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 KIR2DS5Q14953 304 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ALG11Q2TAA5 492 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 VPS26BQ4G0F5 336 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ICE2Q659A1 982 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NOXRED1Q6NXP6 359 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TMIGD1Q6UXZ0 262 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 GOLM1Q8NBJ4 401 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HUS1BQ8NHY5 278 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 APOBEC4Q8WW27 367 aaKnown RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 POP5Q969H6 163 aaKnown RBP13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 LRRC58Q96CX6 371 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 HBEGFQ99075 208 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 SH3GL1Q99961 368 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 TRIM15Q9C019 465 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 PRDM8Q9NQV8 689 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 POT1Q9NUX5 634 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 STOML1Q9UBI4 398 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 POMPQ9Y244 141 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 WDR37Q9Y2I8 494 aa13.58□□□□□ -0.24
TRAPPC6B-206ENST00000556765 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 NKX2-8O15522 239 aa13.57□□□□□ -0.24
TRAPPC6B-206ENST00000556765 KCNH1O95259 989 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms