RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NPHS2Q9NP85 383 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 TMEM184CQ9NVA4 438 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PNPOQ9NVS9 261 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ZDHHC2Q9UIJ5 367 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 SNX6Q9UNH7 406 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 SH2B3Q9UQQ2 575 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 RNF11Q9Y3C5 154 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 FIS1Q9Y3D6 152 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 HS3ST3B1Q9Y662 390 aa9.13□□□□□ -0.95
ACTN1-215ENST00000555616 ANKRD12Q6UB98 2062 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 H7BY64 318 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 PEX12O00623 359 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 FOXS1O43638 330 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 WFS1O76024 890 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 WISP1O95388 367 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 FBLP22087 321 aaKnown RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 SOX8P57073 446 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 PHEXP78562 749 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF33BQ06732 778 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 SLBPQ14493 270 aaKnown RBP eCLIP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 VWA5B1Q5TIE3 1220 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 GKAP1Q5VSY0 366 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 CLEC6AQ6EIG7 209 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 GRHL2Q6ISB3 625 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 MED27Q6P2C8 311 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 SPATA21Q7Z572 469 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 HPS6Q86YV9 775 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 PLD3Q8IV08 490 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 AMER3Q8N944 861 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 CLEC1AQ8NC01 280 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 FDCSPQ8NFU4 85 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 ABHD11Q8NFV4 315 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 TWIST2Q8WVJ9 160 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 PRAP1Q96NZ9 151 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 NUDT9Q9BW91 350 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 SOX17Q9H6I2 414 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 SEMA3GQ9NS98 782 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 C14orf105Q9NVL8 296 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 GPR83Q9NYM4 423 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 KLHL14Q9P2G3 628 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF282Q9UDV7 671 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 FBXL4Q9UKA2 621 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 G3BP2Q9UN86 482 aaKnown RBP9.12□□□□□ -0.95
ACTN1-215ENST00000555616 CDC14AQ9UNH5 594 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 USH1CQ9Y6N9 552 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 MAU2Q9Y6X3 613 aa9.12□□□□□ -0.95
ACTN1-215ENST00000555616 A0A1B0GTL3 188 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 A0A1W2PQ72 361 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TMEM233B4DJY2 109 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 H0YIV9 168 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 PYCARD-AS1I3L0S3 204 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 MANBAO00462 879 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SOCS6O14544 535 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 FFAR3O14843 346 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 GPR42O15529 346 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ULK1O75385 1050 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SKAP2O75563 359 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SORBS2O94875 1100 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ZGLP1P0C6A0 271 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ALOX15P16050 662 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 VARSP26640 1264 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SERPINB1P30740 379 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 BCL6P41182 706 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 AQP5P55064 265 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 FOXK1P85037 733 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 REEP5Q00765 189 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 OCA2Q04671 838 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 KLC1Q07866 573 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 FAM53BQ14153 422 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 E2F2Q14209 437 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 MYBPC3Q14896 1274 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ZRSR2Q15696 482 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 PDCD2Q16342 344 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ZSCAN26Q16670 478 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 CATSPEREQ5SY80 951 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TMEM214Q6NUQ4 689 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 KIRREL2Q6UWL6 708 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TMIGD1Q6UXZ0 262 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SHISA6Q6ZSJ9 500 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 DDIASQ8IXT1 998 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 OR4K1Q8NGD4 311 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 STT3BQ8TCJ2 826 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 MIEF2Q96C03 454 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TM4SF19Q96DZ7 209 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 C19orf60Q96EN9 201 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SEC16BQ96JE7 1060 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 KCNA7Q96RP8 456 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SMAD5Q99717 465 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ELAC2Q9BQ52 826 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 CRB3Q9BUF7 120 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SARGQ9BW04 601 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms