RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CCNYL2Q5T2Q4 361 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 OR4C11Q6IEV9 310 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 PWWP2BQ6NUJ5 590 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 TMEM214Q6NUQ4 689 aaKnown RBP10.21□□□□□ -0.78
TDP1-211ENST00000555178 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 RIMKLAQ8IXN7 391 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 AMER2Q8N7J2 671 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 OR9A4Q8NGU2 314 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 C16orf78Q8WTQ4 265 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 QRFPRQ96P65 431 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 NMRK1Q9NWW6 199 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 ZIM2Q9NZV7 527 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 C5AR2Q9P296 337 aa10.21□□□□□ -0.78
TDP1-211ENST00000555178 A0A0A6YYC8 382 aaPredicted RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 A0A0A6YYD5 115 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 I3L1I5 382 aaPredicted RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 SGK494L7N484 410 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 AIM2O14862 343 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 OR2B3O76000 313 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 MYO1DO94832 1006 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 NTRK1P04629 796 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 PRPS2P11908 318 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 HIST1H1TP22492 207 aaPredicted RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 ATP5A1P25705 553 aaKnown RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 GSTM2P28161 218 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 MAPK1P28482 360 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 MRPL19P49406 292 aaKnown RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 HNRNPH2P55795 449 aaKnown RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 PHC1P78364 1004 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 MAT1AQ00266 395 aaKnown RBP10.2□□□□□ -0.78
TDP1-211ENST00000555178 RELAQ04206 551 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 TARDBPQ13148 414 aaKnown RBP eCLIP10.2□□□□□ -0.78
TDP1-211ENST00000555178 RUNX2Q13950 521 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 ZNF385BQ569K4 471 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 REP15Q6BDI9 236 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 LCN10Q6JVE6 187 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 TRIM40Q6P9F5 258 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 NUDT13Q86X67 352 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 ACOT4Q8N9L9 421 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 CAMKVQ8NCB2 501 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.2□□□□□ -0.78
TDP1-211ENST00000555178 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 SPDL1Q96EA4 605 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 KCNC2Q96PR1 638 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 CLMPQ9H6B4 373 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 IRAK4Q9NWZ3 460 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 MCM8Q9UJA3 840 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 PCDHGA1Q9Y5H4 931 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 AHCTF1Q8WYP5 2266 aa10.2□□□□□ -0.78
TDP1-211ENST00000555178 A0A1W2PS29 197 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLC22A2O15244 555 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 TOX3O15405 576 aaPredicted RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 ZNF749O43361 778 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 KIAA0754O94854 1291 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SNRPB2P08579 225 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 PIM1P11309 404 aaPredicted RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 ACPPP15309 386 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CALB2P22676 271 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CCKBRP32239 447 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 NUDT2P50583 147 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 MAPK12P53778 367 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CLDN8P56748 225 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 STXBP1P61764 594 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLC25A3Q00325 362 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 ILKQ13418 452 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 TMEM35AQ53FP2 167 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 LACTB2Q53H82 288 aaPredicted RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 ZC3H12BQ5HYM0 836 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 PAGE3Q5JUK9 113 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 C1orf189Q5VU69 101 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLC2A7Q6PXP3 512 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 ANKRD46Q86W74 232 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 RBM15BQ8NDT2 890 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 CMTM5Q96DZ9 223 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 THAP11Q96EK4 314 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLC39A3Q9BRY0 314 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CENPKQ9BS16 269 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 TRIM8Q9BZR9 551 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CHRNA10Q9GZZ6 450 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 DDX31Q9H8H2 851 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 SIRT5Q9NXA8 310 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLAMF8Q9P0V8 285 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 NAALAD2Q9Y3Q0 740 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 MAU2Q9Y6X3 613 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 HYKKA2RU49 373 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 FAM234BA2RU67 622 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 GLOD5A6NK44 160 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 B2RBV5 119 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 FAM227AF5H4B4 570 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 CEACAM1P13688 526 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 ADSLP30566 484 aaPredicted RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 OR1D4P47884 311 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 HNRNPFP52597 415 aaKnown RBP10.19□□□□□ -0.78
TDP1-211ENST00000555178 EFNA3P52797 238 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 KCNK10P57789 538 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 E2F1Q01094 437 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLAMF1Q13291 335 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 SLC9A5Q14940 896 aa10.19□□□□□ -0.78
TDP1-211ENST00000555178 MUM1Q2TAK8 710 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms