RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 CD244Q9BZW8 370 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 REXO4Q9GZR2 422 aaKnown RBP10.4□□□□□ -0.74
ABCD4-221ENST00000554453 RAB17Q9H0T7 212 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 NMRAL1Q9HBL8 299 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 PRDM7Q9NQW5 492 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 KLHL1Q9NR64 748 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 PRTFDC1Q9NRG1 225 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 ANKRD10Q9NXR5 420 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 WWOXQ9NZC7 414 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 CD274Q9NZQ7 290 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 ZNF835Q9Y2P0 537 aa10.4□□□□□ -0.74
ABCD4-221ENST00000554453 SPENQ96T58 3664 aaKnown RBP10.4□□□□□ -0.74
ABCD4-221ENST00000554453 A0A088AWK7 358 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 TRGV8A0A0C4DH27 118 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CCL21O00585 134 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CYR61O00622 381 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 B3GALT2O43825 422 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CTNSO60931 367 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 FAM155BO75949 473 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 MLYCDO95822 493 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 EPORP19235 508 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CD22P20273 847 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ZNF10P21506 573 aaPredicted RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 TPP2P29144 1249 aaPredicted RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CRABP2P29373 138 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CA7P43166 264 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CYB561P49447 251 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 HLCSP50747 726 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CLCN2P51788 898 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PLA2G16P53816 162 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 MTTPP55157 894 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PMP22Q01453 160 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ALDH6A1Q02252 535 aaKnown RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 DLG1Q12959 904 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 CHIT1Q13231 466 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ART3Q13508 389 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 MAPKAPK3Q16644 382 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PDK4Q16654 411 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 HIST2H2ACQ16777 129 aaPredicted RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 FBXO48Q5FWF7 155 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 XKR6Q5GH73 641 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 HIST2H2AA3Q6FI13 130 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 MTFR2Q6P444 385 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 SYT10Q6XYQ8 523 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 GALNTL5Q7Z4T8 443 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ZNF227Q86WZ6 799 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ZNF595Q8IYB9 648 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PPM1NQ8N819 430 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 FAM98AQ8NCA5 519 aaKnown RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 SRFBP1Q8NEF9 429 aaKnown RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 B3GNT7Q8NFL0 401 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ADAMTS18Q8TE60 1221 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 FBF1Q8TES7 1133 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 GPR137Q96N19 417 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 SERINC2Q96SA4 455 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 PNO1Q9NRX1 252 aaKnown RBP10.39□□□□□ -0.75
ABCD4-221ENST00000554453 KCMF1Q9P0J7 381 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 RNF112Q9ULX5 631 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 DAPP1Q9UN19 280 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 ENTPD4Q9Y227 616 aa10.39□□□□□ -0.75
ABCD4-221ENST00000554453 INTS1Q8N201 2190 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 A0A0G2JN53 185 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 CCDC189A1A4V9 331 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 SYNDIG1LA6NDD5 238 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 FCHO1O14526 889 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ASNA1O43681 348 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 CCNT2O60583 730 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 LTA4HP09960 611 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 TFEBP19484 476 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 LIM2P55344 173 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 IRF8Q02556 426 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 TGM3Q08188 693 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 NAB1Q13506 487 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 RCN2Q14257 317 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 EFTUD2Q15029 972 aaKnown RBP eCLIP10.38□□□□□ -0.751e-7■■■□□ 18.5
ABCD4-221ENST00000554453 PAGE2BQ5JRK9 111 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 TRIM40Q6P9F5 258 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 Q6ZPB1 254 aaPredicted RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 UBE3DQ7Z6J8 389 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 CCDC25Q86WR0 208 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 SPPL2CQ8IUH8 684 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 SIAH3Q8IW03 269 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ZNF473Q8WTR7 871 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 UBE2E3Q969T4 207 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 F2RL3Q96RI0 385 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ATOH8Q96SQ7 321 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 TBCDQ9BTW9 1192 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ROGDIQ9GZN7 287 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ALG9Q9H6U8 611 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 MRPS33Q9Y291 106 aaKnown RBP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 ACOT9Q9Y305 439 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
ABCD4-221ENST00000554453 TEX15Q9BXT5 2789 aa10.38□□□□□ -0.75
ABCD4-221ENST00000554453 FREM3P0C091 2139 aa10.37□□□□□ -0.75
ABCD4-221ENST00000554453 NPIPA5E9PKD4 350 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms