RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CRB3Q9BUF7 120 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 ANKRD19PQ9H560 264 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 ACTL8Q9H568 366 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 KLHL8Q9P2G9 620 aaPredicted RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 KIAA1217Q5T5P2 1943 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 ZSWIM8A7E2V4 1837 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 PARP14Q460N5 1801 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 A0A1B0GV90 55 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ERI2A8K979 691 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 GPR37O15354 613 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 LZTS3O60299 673 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 DHFRP00374 187 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 S100A9P06702 114 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 HIST1H2AGP0C0S8 130 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 SLURP2P0DP57 97 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SPI1P17947 270 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HIST1H2ADP20671 130 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 UBA1P22314 1058 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 RORAP35398 523 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 EIF2S3P41091 472 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 GZMMP51124 257 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ACTR1AP61163 376 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 PPP3R1P63098 170 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 DEFA5Q01523 94 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 KIAA0040Q15053 153 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ZNF699Q32M78 642 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SEZ6Q53EL9 994 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 INO80DQ53TQ3 878 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 HECTD3Q5T447 861 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HIST2H2AA3Q6FI13 130 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ISCA2Q86U28 154 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 CCDC117Q8IWD4 279 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 KRT78Q8N1N4 520 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 PTGR2Q8N8N7 351 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 L3MBTL4Q8NA19 623 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 GPR150Q8NGU9 434 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 COQ8AQ8NI60 647 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SCARB1Q8WTV0 552 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ZDHHC1Q8WTX9 485 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 EXOSC8Q96B26 276 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 MS4A3Q96HJ5 214 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HIST1H2AHQ96KK5 128 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HIST1H2AJQ99878 128 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ELOVL4Q9GZR5 314 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 MROH8Q9H579 483 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 GLOD4Q9HC38 313 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 AGO4Q9HCK5 861 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 STARD7Q9NQZ5 370 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SEC14L3Q9UDX4 400 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 MALT1Q9UDY8 824 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 TRPS1Q9UHF7 1281 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 LOC390937A0A1W2PQ73 354 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 KCNK1O00180 336 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 CASC3O15234 703 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 VEGFDO43915 354 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 TPST2O60704 377 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 EDN1P05305 212 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ENGP17813 658 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 FPR3P25089 353 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ACTR1BP42025 376 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HSPA7P48741 367 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 KIAA1024LP59773 190 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ZP1P60852 638 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 TAF1AQ15573 450 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 FAM198BQ6UWH4 519 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 TMEM207Q6UWW9 146 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 FAM126BQ8IXS8 530 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 PYROXD2Q8N2H3 581 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 C12orf29Q8N999 325 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ZNF454Q8N9F8 522 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 POP5Q969H6 163 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 C11orf84Q9BUA3 381 aaPredicted RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 RNF32Q9H0A6 362 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SYNDIG1Q9H7V2 258 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 PTPRHQ9HD43 1115 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 UFSP2Q9NUQ7 469 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 SLC25A37Q9NYZ2 338 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 CNOT2Q9NZN8 540 aaKnown RBP9.17□□□□□ -0.94
SIX4-202ENST00000554079 MARK1Q9P0L2 795 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 NUP205Q92621 2012 aa9.17□□□□□ -0.94
SIX4-202ENST00000554079 ANXA2P2A6NMY6 339 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 SULT1C2O00338 296 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 IFRD1O00458 451 aaPredicted RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 FFAR3O14843 346 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 PER2O15055 1255 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 TO15178 435 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 GPR42O15529 346 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 KDM4BO94953 1096 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 DIRAS1O95057 198 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 GADD45GO95257 159 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 MT-CYBP00156 380 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms