RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 GMNCA6NCL1 334 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 C9J4A7 227 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 RTCAO00442 366 aaKnown RBP18.3■□□□□ 0.52
PSEN1-207ENST00000553599 PEX11AO75192 247 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 RDH16O75452 317 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ATP6AP2O75787 350 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 KLK1P06870 262 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 SPINK2P20155 84 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ITGAXP20702 1163 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 CERS1P27544 350 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 TPP2P29144 1249 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-207ENST00000553599 TIA1P31483 386 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSEN1-207ENST00000553599 AQP5P55064 265 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 C6orf136Q5SQH8 315 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 CCNYL2Q5T2Q4 361 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ARHGAP40Q5TG30 622 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 OGFOD2Q6N063 350 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ACAD11Q709F0 780 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 LARP4Q71RC2 724 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSEN1-207ENST00000553599 MED25Q71SY5 747 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 AMER3Q8N944 861 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 MR1Q95460 341 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 OR1F2PQ96R84 312 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 SLC26A1Q9H2B4 701 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 AKTIPQ9H8T0 292 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ASIC5Q9NY37 505 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 PHF11Q9UIL8 331 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 DAPP1Q9UN19 280 aa18.3■□□□□ 0.52
PSEN1-207ENST00000553599 IGLV3-12A0A075B6K2 115 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 BLACEA4D250 179 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 PCDH7O60245 1069 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 RAD1O60671 282 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 EEDO75530 441 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 LIPCP11150 499 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 RNH1P13489 461 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 LBPP18428 481 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 OR1D4P47884 311 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 ERVK-8P63133 956 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 SNRPNP63162 240 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 RPL38P63173 70 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 EMX2Q04743 252 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 SLAMF1Q13291 335 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 GALNTL6Q49A17 601 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 RFTN2Q52LD8 501 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 MRM1Q6IN84 353 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 NOXRED1Q6NXP6 359 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 OVCH1Q7RTY7 1134 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 TIPARPQ7Z3E1 657 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 MAVSQ7Z434 540 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 DTX1Q86Y01 620 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 FAM9CQ8IZT9 166 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 CCDC28BQ9BUN5 200 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 SORBS1Q9BX66 1292 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 TGIF2Q9GZN2 237 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 WDR54Q9H977 334 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 NPHS2Q9NP85 383 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 C14orf105Q9NVL8 296 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 IFT80Q9P2H3 777 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 ZNF282Q9UDV7 671 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 GPN3Q9UHW5 284 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 NXT1Q9UKK6 140 aaKnown RBP18.29■□□□□ 0.52
PSEN1-207ENST00000553599 MAU2Q9Y6X3 613 aa18.29■□□□□ 0.52
PSEN1-207ENST00000553599 SEC16AO15027 2179 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 GNG14A0A1W2PPG7 69 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 C21orf140B9A014 251 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 CHST10O43529 356 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 DIAPH2O60879 1101 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 B3GALT4O96024 378 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 ANXA4P09525 319 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 RAB40ALP0C0E4 278 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 FAM58BPP0C7Q3 252 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 EPHA3P29320 983 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 TLX1P31314 330 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 MAPK12P53778 367 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 LIM2P55344 173 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 RAB38P57729 211 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 OCA2Q04671 838 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 RUNX2Q13950 521 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 VWA5B1Q5TIE3 1220 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 SPATA19Q7Z5L4 167 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 GPR180Q86V85 440 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 CA13Q8N1Q1 262 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 METTL27Q8N6F8 245 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 FNDC5Q8NAU1 212 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 OR51Q1Q8NH59 317 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 PPP1R36Q96LQ0 422 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 CHST8Q9H2A9 424 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 WDR55Q9H6Y2 383 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 PRDM9Q9NQV7 894 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 SLC22A11Q9NSA0 550 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 NOP53Q9NZM5 478 aaKnown RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 KLHL14Q9P2G3 628 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 TRPC4Q9UBN4 977 aa18.28■□□□□ 0.52
PSEN1-207ENST00000553599 EIF3LQ9Y262 564 aaKnown RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 MRPS33Q9Y291 106 aaKnown RBP18.28■□□□□ 0.52
PSEN1-207ENST00000553599 SDK2Q58EX2 2172 aa18.27■□□□□ 0.52
PSEN1-207ENST00000553599 ZNF860A6NHJ4 632 aa18.27■□□□□ 0.52
PSEN1-207ENST00000553599 PSMD12O00232 456 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms