RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PDLIM5Q96HC4 596 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 SERPINB12Q96P63 405 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 TTYH2Q9BSA4 534 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 FAM167BQ9BTA0 163 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 NPLQ9BXD5 320 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 KLHL31Q9H511 634 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 PNPLA3Q9NST1 481 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 DEPPQ9NTK1 212 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 ARL15Q9NXU5 204 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 KCMF1Q9P0J7 381 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF223Q9UK11 482 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 FBXW2Q9UKT8 454 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 L3MBTL1Q9Y468 752 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 CLDN16Q9Y5I7 305 aa9.16□□□□□ -0.94
TRAFD1-207ENST00000550051 PINLYPA6NC86 204 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SYNDIG1LA6NDD5 238 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 NPIPA2E9PIF3 369 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 NPIPA3F8WFD2 350 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 CLDN4O14493 209 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SUSD5O60279 629 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 KRT14P02533 472 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 AHSGP02765 367 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 ENO2P09104 434 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 KLK2P20151 261 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 GABRB3P28472 473 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 ZFP36L2P47974 494 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 VPS41P49754 854 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 CDKN2DP55273 166 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 MYBPHQ13203 477 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 RUNX2Q13950 521 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 KCTD19Q17RG1 926 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 HYAL4Q2M3T9 481 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 HECTD2Q5U5R9 776 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 ARSKQ6UWY0 536 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SLC22A16Q86VW1 577 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SCUBE1Q8IWY4 988 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 OR5M3Q8NGP4 307 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 GABPB2Q8TAK5 448 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SLC5A11Q8WWX8 675 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 NRGNQ92686 78 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 LINGO1Q96FE5 620 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 PDLIM2Q96JY6 352 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 NDNQ99608 321 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 AIF1LQ9BQI0 150 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 CCDC77Q9BR77 488 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 AICDAQ9GZX7 198 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 PELI2Q9HAT8 420 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 IARS2Q9NSE4 1012 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 CCM2LQ9NUG4 571 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 ST6GALNAC2Q9UJ37 374 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 EDARQ9UNE0 448 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 ERVK-11Q9UQG0 969 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 MAD1L1Q9Y6D9 718 aa9.15□□□□□ -0.94
TRAFD1-207ENST00000550051 MAP1AP78559 2803 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ARHGAP21Q5T5U3 1957 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A0G2JNJ9 132 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 CTAGE15A4D2H0 777 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 FIGNL2A6NMB9 653 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 A8MVJ9 347 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ACOT7O00154 380 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 SYT5O00445 386 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 AQP7O14520 342 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 PRKNO60260 465 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 OR2J2O76002 312 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 OR6B1O95007 311 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 PEX19P40855 299 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 HNF4AP41235 474 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 TERF1P54274 439 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 STXBP1P61764 594 aaKnown RBP9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 BTN3A2P78410 334 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 REEP5Q00765 189 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 PLGLB1Q02325 96 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC25A35Q3KQZ1 300 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 RTL6Q6ICC9 239 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF585AQ6P3V2 769 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 TTC27Q6P3X3 843 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 NXPE4Q6UWF7 544 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 IL20RBQ6UXL0 311 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 B3GNT6Q6ZMB0 384 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 GK5Q6ZS86 529 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 TRILQ7L0X0 811 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 GALNT7Q86SF2 657 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 CTAGE6Q86UF2 777 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 RETREG3Q86VR2 466 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 THOC6Q86W42 341 aaKnown RBP9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 LIX1LQ8IVB5 337 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF595Q8IYB9 648 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 TMEM132CQ8N3T6 1108 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM109AQ8N4B1 249 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 NAT8LQ8N9F0 302 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 GOLM1Q8NBJ4 401 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 OR5M9Q8NGP3 310 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 OR10Q1Q8NGQ4 319 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 OR8K3Q8NH51 312 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ASB15Q8WXK1 588 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ANKRD7Q92527 254 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms