RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 RAB8AP61006 207 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 SLC10A1Q14973 349 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 HSPB2Q16082 182 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 FLYWCH1Q4VC44 716 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 C1orf185Q5T7R7 199 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 RIPPLY2Q5TAB7 128 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 RAD9BQ6WBX8 426 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 RTL4Q6ZR62 310 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 TRILQ7L0X0 811 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 CDC20BQ86Y33 519 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 DENND6AQ8IWF6 608 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 TMEM132CQ8N3T6 1108 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 NCLNQ969V3 563 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 PDLIM2Q96JY6 352 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 FAR2Q96K12 515 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 SGCZQ96LD1 299 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 DEPPQ9NTK1 212 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 ARL15Q9NXU5 204 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 TAS2R13Q9NYV9 303 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 CRIM1Q9NZV1 1036 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 PPIEQ9UNP9 301 aaKnown RBP15.72■□□□□ 0.11
VPS29-204ENST00000548259 FLNAP21333 2647 aaKnown RBP15.72■□□□□ 0.11
VPS29-204ENST00000548259 AKAP6Q13023 2319 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 A0A088AWK7 358 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 SDR42E2A6NKP2 422 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 SYT5O00445 386 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 DNAJB6O75190 326 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 ZNF10P21506 573 aaPredicted RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 HNF4AP41235 474 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 SCTRP47872 440 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 AP1S2P56377 157 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 HSD17B7P56937 341 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 BMPR2Q13873 1038 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 ZNF549Q6P9A3 640 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 PAMR1Q6UXH9 720 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 HSDL2Q6YN16 418 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 MBOAT1Q6ZNC8 495 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 FAM47EQ6ZV65 393 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 EEF1AKMT1Q8WVE0 214 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 C18orf12Q96KH6 178 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 AIF1LQ9BQI0 150 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 AARSD1Q9BTE6 412 aaKnown RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 ADAP2Q9NPF8 381 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 C20orf96Q9NUD7 363 aaPredicted RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 MYOTQ9UBF9 498 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 MTRF1LQ9UGC7 380 aaKnown RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 FOXD3Q9UJU5 478 aaPredicted RBP15.71■□□□□ 0.11
VPS29-204ENST00000548259 ADAMTS6Q9UKP5 1117 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 DYRK1BQ9Y463 629 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 FAM215AQ9Y5M1 114 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 CLCA3PQ9Y6N3 262 aa15.71■□□□□ 0.11
VPS29-204ENST00000548259 SCN3AQ9NY46 2000 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 DVL2O14641 736 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 HCN1O60741 890 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 GLSO94925 669 aaPredicted RBP15.7■□□□□ 0.1
VPS29-204ENST00000548259 B3GALT4O96024 378 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 P04436 131 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 SLC1A2P43004 574 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 STXBP1P61764 594 aaKnown RBP15.7■□□□□ 0.1
VPS29-204ENST00000548259 DHX9Q08211 1270 aaKnown RBP15.7■□□□□ 0.1
VPS29-204ENST00000548259 SLC13A2Q13183 592 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 RCN2Q14257 317 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 DEFB113Q30KQ7 82 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 TMEM251Q8N6I4 163 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 GOLM1Q8NBJ4 401 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 SLC5A11Q8WWX8 675 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 DAZLQ92904 295 aaKnown RBP15.7■□□□□ 0.1
VPS29-204ENST00000548259 PYCR2Q96C36 320 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 FAM167BQ9BTA0 163 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 NEUROD4Q9HD90 331 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 PRTFDC1Q9NRG1 225 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 HOMER3Q9NSC5 361 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 SACM1LQ9NTJ5 587 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 FBXO5Q9UKT4 447 aa15.7■□□□□ 0.1
VPS29-204ENST00000548259 ATP6AP2A0A1C7CYW4 349 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 PINLYPA6NC86 204 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 ATP6AP2O75787 350 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 OR6B1O95007 311 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 IFNA16P05015 189 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 SERPINA6P08185 405 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 MLNP12872 115 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 SAT1P21673 171 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 HPDP32754 393 aaPredicted RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 SOX3P41225 446 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 MAGEA5P43359 124 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 ASCL1P50553 236 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 RBBP5Q15291 538 aaKnown RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 ELAVL1Q15717 326 aaKnown RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 OPN5Q6U736 354 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 LIX1LQ8IVB5 337 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 ZNF595Q8IYB9 648 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 CA13Q8N1Q1 262 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 FBXW8Q8N3Y1 598 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 OR5L2Q8NGL0 311 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 OR56A3Q8NH54 315 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 RNASE6Q93091 150 aaKnown RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 RASL10BQ96S79 203 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 BAG1Q99933 345 aaPredicted RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 NPLQ9BXD5 320 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms