RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TSC22D4Q9Y3Q8 395 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 DNAJC15Q9Y5T4 150 aa11.46□□□□□ -0.57
HDAC7-226ENST00000547259 TNRC6AQ8NDV7 1962 aaKnown RBP11.46□□□□□ -0.58
HDAC7-226ENST00000547259 CNTRLQ7Z7A1 2325 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MAGEB17A8MXT2 336 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 SLCO1B7G3V0H7 640 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 TXNDC9O14530 226 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 PIP5K1BO14986 540 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 SH3BGRLO75368 114 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 CLEC3AO75596 197 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 OR2B3O76000 313 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 CD63P08962 238 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 RAB40ALP0C0E4 278 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MSL3P1P0C860 447 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 HSD3B1P14060 373 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 HSD3B2P26439 372 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 LSP1P33241 339 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 PIK3CBP42338 1070 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 HK2P52789 917 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 RRADP55042 308 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 ITGA1P56199 1179 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 RPS13P62277 151 aaKnown RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF33BQ06732 778 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 CSTF3Q12996 717 aaKnown RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 IMPG1Q17R60 797 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 HKDC1Q2TB90 917 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 TOR1AIP1Q5JTV8 583 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 WASHC2DQ5SRD0 308 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MED25Q71SY5 747 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 VN1R5Q7Z5H4 357 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 WDR75Q8IWA0 830 aaKnown RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 LRRC34Q8IZ02 419 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 TMEM102Q8N9M5 508 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 OR1L3Q8NH93 324 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 ZCCHC10Q8TBK6 192 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 NT5CQ8TCD5 201 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MR1Q95460 341 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF501Q96CX3 271 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 TM4SF19Q96DZ7 209 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 CMTM7Q96FZ5 175 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 PPP1R36Q96LQ0 422 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 IP6K3Q96PC2 410 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MACROD1Q9BQ69 325 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 C17orf62Q9BQA9 187 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 DPH2Q9BQC3 489 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MS4A8Q9BY19 250 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 SLAMF7Q9NQ25 335 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 FGFR1OP2Q9NVK5 253 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 VTI1BQ9UEU0 232 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 SERTAD3Q9UJW9 196 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 SLC12A4Q9UP95 1085 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 MAP4K5Q9Y4K4 846 aa11.45□□□□□ -0.58
HDAC7-226ENST00000547259 URADA6NGE7 173 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 TRPC5OSA6NMA1 111 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 K7EM74 188 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 SLC28A1O00337 649 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 FOXE1O00358 373 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 HDAC3O15379 428 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 RGS14O43566 566 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 TGFB1P01137 390 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 IGHEP01854 428 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 CTSBP07858 339 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 SERPINA6P08185 405 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 HBQ1P09105 142 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 LINC00032P0C843 101 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 GNLYP22749 145 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 CCL11P51671 97 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 RAP1GDS1P52306 607 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 STXBP1P61764 594 aaKnown RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 BTKQ06187 659 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 PWP1Q13610 501 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 GRM7Q14831 915 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 UGT3A2Q3SY77 523 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF517Q6ZMY9 492 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 CHSY3Q70JA7 882 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 GBP7Q8N8V2 638 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 C19orf60Q96EN9 201 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 CHMP6Q96FZ7 201 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF285Q96NJ3 590 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 SERPINI1Q99574 410 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 CENPKQ9BS16 269 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 NUF2Q9BZD4 464 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 SPRTNQ9H040 489 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 NSRP1Q9H0G5 558 aaKnown RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 OR51B5Q9H339 312 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 BRF2Q9HAW0 419 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 RUVBL1Q9Y265 456 aaKnown RBP11.44□□□□□ -0.58
HDAC7-226ENST00000547259 PTGDR2Q9Y5Y4 395 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 USH1CQ9Y6N9 552 aa11.44□□□□□ -0.58
HDAC7-226ENST00000547259 SERTM1A2A2V5 107 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ARGFXA6NJG6 315 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 SAP18O00422 153 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ZSCAN9O15535 394 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 CEACAM4O75871 244 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 DNAJB5O75953 348 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TIAF1O95411 115 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ETHE1O95571 254 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms