RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 VWA7Q9Y334 891 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 JRKLQ9Y4A0 524 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 LIPGQ9Y5X9 500 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 A0A0G2JN53 185 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 NKX2-6A6NCS4 301 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 LRIT2A6NDA9 550 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 CYR61O00622 381 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 FCHO1O14526 889 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 HIST1H2AGP0C0S8 130 aaPredicted RBP11.67□□□□□ -0.54
COPS7A-221ENST00000546229 HIST1H2ADP20671 130 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 CLCN2P51788 898 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 RAB38P57729 211 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 ZC3HC1Q86WB0 502 aaKnown RBP11.67□□□□□ -0.54
COPS7A-221ENST00000546229 PALM2Q8IXS6 379 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 DMRTC2Q8IXT2 367 aaPredicted RBP11.67□□□□□ -0.54
COPS7A-221ENST00000546229 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 PSD4Q8NDX1 1056 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 CA5BP1Q8WTZ4 195 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 TMEM125Q96AQ2 219 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 VMP1Q96GC9 406 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 SEC16BQ96JE7 1060 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 HIST1H2AHQ96KK5 128 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 OSBPL9Q96SU4 736 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 HIST1H2AJQ99878 128 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 AIF1LQ9BQI0 150 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 TMEM79Q9BSE2 394 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 NAT9Q9BTE0 207 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 H2AFJQ9BTM1 129 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 UCK2Q9BZX2 261 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 OARD1Q9Y530 152 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 FAM215AQ9Y5M1 114 aa11.67□□□□□ -0.54
COPS7A-221ENST00000546229 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 OR6B1O95007 311 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 IGHG3P01860 377 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 TPOP07202 933 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 EPORP19235 508 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 CD22P20273 847 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 CHRNB4P30926 498 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 ELK3P41970 407 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 GDF5P43026 501 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 HSD17B7P56937 341 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 NUP107P57740 925 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 FOXO1Q12778 655 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 CBLBQ13191 982 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 E2F2Q14209 437 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 TSNQ15631 228 aaKnown RBP11.66□□□□□ -0.54
COPS7A-221ENST00000546229 RTL6Q6ICC9 239 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 ARHGAP11AQ6P4F7 1023 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 ZNF321PQ8N8H1 164 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 OR2M7Q8NG81 312 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 GRK7Q8WTQ7 553 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
COPS7A-221ENST00000546229 CHTF18Q8WVB6 975 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 RHBDF1Q96CC6 855 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 RASL10BQ96S79 203 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 NPLQ9BXD5 320 aaPredicted RBP11.66□□□□□ -0.54
COPS7A-221ENST00000546229 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
COPS7A-221ENST00000546229 RHBGQ9H310 441 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 TP63Q9H3D4 680 aaPredicted RBP11.66□□□□□ -0.54
COPS7A-221ENST00000546229 SH2D2AQ9NP31 389 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 ADAP2Q9NPF8 381 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 CHMP2BQ9UQN3 213 aa11.66□□□□□ -0.54
COPS7A-221ENST00000546229 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 URADA6NGE7 173 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 FAM90A27PA6NNH2 459 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 KLRC4-KLRK1H3BQV0 150 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 CES2O00748 559 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 TAPBPO15533 448 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ERI3O43414 337 aaKnown RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 OR2J2O76002 312 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 TUBB4AP04350 444 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 HOXD4P09016 255 aaPredicted RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 C1GALT1C1LP0DN25 315 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 CERS1P27544 350 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 SOX3P41225 446 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 SSR4P51571 173 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 HK2P52789 917 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 TAS2R39P59534 338 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 BTN3A2P78410 334 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ELAVL1Q15717 326 aaKnown RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ABHD17CQ6PCB6 329 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ZNF793Q6ZN11 406 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 CEP128Q6ZU80 1094 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 CCDC71Q8IV32 467 aaPredicted RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 GPALPP1Q8IXQ4 340 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 EID3Q8N140 333 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 TBC1D19Q8N5T2 526 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 FAM47BQ8NA70 645 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ASB5Q8WWX0 329 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms