RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZNF296Q8WUU4 475 aaPredicted RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 CCDC107Q8WV48 283 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 PSKH2Q96QS6 385 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 TRIM2Q9C040 744 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 BHLHE41Q9C0J9 482 aaPredicted RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 OR2AG1Q9H205 316 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 SLA2Q9H6Q3 261 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 OARD1Q9Y530 152 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 TIAM2Q8IVF5 1701 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 A0A1W2PRQ8 180 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 TOXO94900 526 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 PSMA6P60900 246 aaKnown RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF155Q12901 538 aaPredicted RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 VAPAQ9P0L0 249 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 MRPS14O60783 128 aaKnown RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 PTPN2P17706 415 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 KELP23276 732 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 MPIP34949 423 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 FAM189BP81408 668 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 TRMT61BQ9BVS5 477 aaKnown RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 ZFR2Q9UPR6 939 aaKnown RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 PCDHB14Q9Y5E9 798 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 MYO9BQ13459 2157 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 A8MU76 341 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 H7C2Y5 167 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 ACOT8O14734 319 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 CSNK2A2P19784 350 aaPredicted RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 SLC11A1P49279 550 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 BCL2L14Q9BZR8 327 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 REEP4Q9H6H4 257 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 PHPT1Q9NRX4 125 aaPredicted RBP18.65■□□□□ 0.58
SUDS3-204ENST00000543473 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
SUDS3-204ENST00000543473 CD2P06729 351 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 KEAP1Q14145 624 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 AGAP6Q5VW22 663 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 HSDL2Q6YN16 418 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 FAM217AQ8IXS0 508 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 SLC5A8Q8N695 610 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 COX18Q8N8Q8 333 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 DENND6BQ8NEG7 585 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 ATP6V1C2Q8NEY4 427 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 AGAP4Q96P64 663 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 DPCDQ9BVM2 203 aaPredicted RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 EEF1E1O43324 174 aaKnown RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 PRNPP04156 253 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 IDSP22304 550 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 SOX4Q06945 474 aaPredicted RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 PRAMEF14Q5SWL7 426 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF648Q5T619 568 aaPredicted RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 PRAMEF13Q5VWM6 474 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 CNKSR3Q6P9H4 555 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 C17orf99Q6UX52 265 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF534Q76KX8 674 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 VWA5B2Q8N398 1253 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 OR2AP1Q8NGE2 309 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 C15orf40Q8WUR7 153 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 FOLH1BQ9HBA9 442 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 TAS2R10Q9NYW0 307 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 PPP6CO00743 305 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 TPRG1Q6ZUI0 275 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 NOXA1Q86UR1 476 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 INO80EQ8NBZ0 244 aaPredicted RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 SCRN2Q96FV2 425 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 ZC3H10Q96K80 434 aaKnown RBP18.64■□□□□ 0.57
SUDS3-204ENST00000543473 LGR4Q9BXB1 951 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 ADAP2Q9NPF8 381 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 YIPF1Q9Y548 306 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 C4AP0C0L4 1744 aa18.64■□□□□ 0.57
SUDS3-204ENST00000543473 UPK3BL1B0FP48 263 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 UPK3BL2E5RIL1 263 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 CRYZL1O95825 349 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 BDKRB1P46663 353 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 DNASE1L1P49184 302 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 NHSL2Q5HYW2 709 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 RPLP0P6Q8NHW5 317 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 RIOK2Q9BVS4 552 aaKnown RBP18.63■□□□□ 0.57
SUDS3-204ENST00000543473 OR51I1Q9H343 314 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 HCN3Q9P1Z3 774 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 LRRN3E7EW58 273 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF3P17036 446 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 HSD17B12Q53GQ0 312 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 PRAMEF17Q5VTA0 474 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 LHFPL3Q86UP9 236 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 GDPD1Q8N9F7 314 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 OR10T2Q8NGX3 314 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 LRRN3Q9H3W5 708 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 GPR45Q9Y5Y3 372 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 TAF1P21675 1872 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 OR7A10O76100 309 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 AMD1P17707 334 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 CLK3P49761 638 aaKnown RBP18.63■□□□□ 0.57
SUDS3-204ENST00000543473 NFATC2Q13469 925 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 CAMK1Q14012 370 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 XKR4Q5GH76 650 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 POMZP3Q6PJE2 187 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 OR13F1Q8NGS4 319 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms