RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 FBXL20Q96IG2 436 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 CDX2Q99626 313 aaPredicted RBP16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ATAD3AQ9NVI7 634 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 APOBEC3BQ9UH17 382 aaKnown RBP16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 HEBP2Q9Y5Z4 205 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TMEM229AB2RXF0 380 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ERI3O43414 337 aaKnown RBP16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 IGLV3-19P01714 112 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 PRKACGP22612 351 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 KDELR2P33947 212 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 SOAT1P35610 550 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 SSR2P43308 183 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ZIC1Q15915 447 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TMTC4Q5T4D3 741 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 RNF220Q5VTB9 566 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ZNF425Q6IV72 752 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 KCT2Q8NC54 265 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TFAP2CQ92754 450 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 MS4A6EQ96DS6 147 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 PYURFQ96I23 114 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 C9orf16Q9BUW7 83 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 SMURF2Q9HAU4 748 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 PRDM6Q9NQX0 595 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TMEM184CQ9NVA4 438 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TRNAU1APQ9NX07 287 aaKnown RBP16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 TAS2R9Q9NYW1 312 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 OR6C2Q9NZP2 312 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 ABCG2Q9UNQ0 655 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 AP3M1Q9Y2T2 418 aa16.42■□□□□ 0.22
TMEM50B-210ENST00000542230 A0A0A6YYD5 115 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 B4GALT2O60909 372 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 CLEC3AO75596 197 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 PRSS23O95084 383 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 MAGP20916 626 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 CD6P30203 668 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 PPP1CAP62136 330 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 ZIK1Q3SY52 487 aaPredicted RBP16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 FOXB2Q5VYV0 432 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 CARM1Q86X55 608 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 NUDT13Q86X67 352 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 OR52E4Q8NGH9 312 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 BARD1Q99728 777 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 BDH2Q9BUT1 245 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 OSBPL11Q9BXB4 747 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 DDX31Q9H8H2 851 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 PCDHGA4Q9Y5G9 962 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 SCN2AQ99250 2005 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 TMEM265A0A087WTH1 108 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 SPTY2D1-AS1A0A0U1RR47 76 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 OR6C74A6NCV1 312 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 H0YJX3 145 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 hCG_2039718K7EN88 272 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 SH3BP5O60239 455 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 CCNDBP1O95273 360 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 OPN1SWP03999 348 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 LINGO3P0C6S8 592 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 PVRP15151 417 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 SHMT2P34897 504 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 RABIFP47224 123 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 LSSP48449 732 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 ILF3Q12906 894 aaKnown RBP eCLIP16.41■□□□□ 0.224e-6■■□□□ 11.9
TMEM50B-210ENST00000542230 HSPB3Q12988 150 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 ZNF438Q7Z4V0 828 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 VN1R4Q7Z5H5 301 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 STK32CQ86UX6 486 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 OR2A14Q96R47 310 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 Q9H521 79 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 ZNF282Q9UDV7 671 aaPredicted RBP16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 DUSP12Q9UNI6 340 aa16.41■□□□□ 0.22
TMEM50B-210ENST00000542230 SPTBP11277 2137 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 IGHV1OR15-9A0A0B4J2B8 117 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 MAN2B1O00754 1011 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 PGRMC2O15173 223 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 NOBOXO60393 691 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 CTSVO60911 334 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 DEAF1O75398 565 aaPredicted RBP16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 TNFRSF1BP20333 461 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 GRK3P35626 688 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 HSPA13P48723 471 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 CYP27C1Q4G0S4 372 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 IKBIPQ70UQ0 350 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 PAGE2Q7Z2X7 111 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 GPBAR1Q8TDU6 330 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 CYGBQ8WWM9 190 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 PRDM7Q9NQW5 492 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 ATG4BQ9Y4P1 393 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 GSAPA4D1B5 854 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 DNAJB6O75190 326 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 TNFRSF21O75509 655 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 PGM3O95394 542 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 SMIM18P0DKX4 95 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 ALPPL2P10696 532 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 CERS1P27544 350 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 CMPK1P30085 196 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms