RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ARID1BQ8NFD5 2236 aaPredicted RBP5.21□□□□□ -1.57
CPSF7-220ENST00000541963 CNOT1A5YKK6 2376 aaKnown RBP5.21□□□□□ -1.57
CPSF7-220ENST00000541963 SRRM3A6NNA2 597 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 STX16-NPEPL1H3BU86 382 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CLIC1O00299 241 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 STX16O14662 325 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CHUKO15111 745 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 LIASO43766 372 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 KIF5CO60282 957 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 PRAMEF2O60811 474 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SRP72O76094 671 aaKnown RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 METTL18O95568 372 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CPNE6O95741 557 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 AP2A1O95782 977 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 FGGP02679 453 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ACP5P13686 325 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 F3P13726 295 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 H2AFXP16104 143 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF7P17097 686 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CCKBRP32239 447 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ADRA1AP35348 466 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 PPARGP37231 505 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 FASLGP48023 281 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 VPS41P49754 854 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 MAZP56270 477 aaKnown RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CLDN6P56747 220 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TAS2R50P59544 299 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ERVPABLB-1P60509 514 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CYP4F2P78329 520 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SARNPP82979 210 aaKnown RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CCZ1BP86790 482 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CCZ1P86791 482 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 B4GALNT1Q00973 533 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CDH17Q12864 832 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TRA2AQ13595 282 aaKnown RBP eCLIP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SNX1Q13596 522 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 AMZ1Q400G9 498 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 GPR33Q49SQ1 333 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ATP13A5Q4VNC0 1218 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 FAM182AQ5T1J6 154 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 KCTD16Q68DU8 428 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 IGFL4Q6B9Z1 124 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TMEM220Q6QAJ8 160 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 FAM151BQ6UXP7 276 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 PPP1R21Q6ZMI0 780 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 DCDC5Q6ZRR9 648 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 NLRP9Q7RTR0 991 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SNX20Q7Z614 316 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 AMZ2Q86W34 360 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 MARCH9Q86YJ5 346 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TRAPPC5Q8IUR0 188 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 KLHDC8BQ8IXV7 354 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 NAGSQ8N159 534 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 PTGR2Q8N8N7 351 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 OR4K2Q8NGD2 314 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 OR10G6Q8NH81 332 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SLC2A12Q8TD20 617 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 C1orf54Q8WWF1 131 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 RTP4Q96DX8 246 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 KTI12Q96EK9 354 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 APOL2Q9BQE5 337 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 TIMM29Q9BSF4 260 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ELOVL1Q9BW60 279 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 OSGEPL1Q9H4B0 414 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 VPS37BQ9H9H4 285 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 PLEKHA2Q9HB19 425 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 EPB41L5Q9HCM4 733 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 THSD1Q9NS62 852 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 SH3BP4Q9P0V3 963 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 CRLS1Q9UJA2 301 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 KCNK6Q9Y257 313 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 R3HDM2Q9Y2K5 976 aaKnown RBP5.21□□□□□ -1.58
CPSF7-220ENST00000541963 ARL5AQ9Y689 179 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 LRP4O75096 1905 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 MYLKQ15746 1914 aa5.21□□□□□ -1.58
CPSF7-220ENST00000541963 GOLGA6L10A0A0M3HER8 536 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 A0A1W2PQM1 296 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 HEATR9A2RTY3 570 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 MGAT4DA6NG13 374 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 FAM90A20PA6NIJ5 464 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 PDZK1P1A8MUH7 402 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 D6RAR5 112 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 B4GAT1O43505 415 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 BUD23O43709 281 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 DUX1O43812 170 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A9O60656 530 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 MTX2O75431 263 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 POP7O75817 140 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 TNFSF15O95150 251 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 APEHP13798 732 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 AMD1P17707 334 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 XRCC1P18887 633 aaPredicted RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A6P19224 532 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A1P22309 533 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A4P22310 534 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 MCM3P25205 808 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 CSTF2P33240 577 aaKnown RBP eCLIP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms