RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RFT1Q96AA3 541 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 DTD2Q96FN9 168 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 FAM20AQ96MK3 541 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 HSD3B7Q9H2F3 369 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 ARRDC1-AS1Q9H2J1 176 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 UBQLN3Q9H347 655 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 Q9H8V8 135 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 MAGEF1Q9HAY2 307 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 DONSONQ9NYP3 566 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 C19orf25Q9UFG5 118 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-217ENST00000541578 KCNN3Q9UGI6 736 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 RALYQ9UKM9 306 aaKnown RBP3.87□□□□□ -1.79
SNHG1-217ENST00000541578 STUB1Q9UNE7 303 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 NSG2Q9Y328 171 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 TEX264Q9Y6I9 313 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 CLCA3PQ9Y6N3 262 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 COLEC10Q9Y6Z7 277 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 KIF24Q5T7B8 1368 aa3.87□□□□□ -1.79
SNHG1-217ENST00000541578 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-217ENST00000541578 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
SNHG1-217ENST00000541578 FER1L6Q2WGJ9 1857 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KIAA1217Q5T5P2 1943 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 C17orf105B2RV13 164 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 SYNGR3O43761 229 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KRT86O43790 486 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 PRKRAO75569 313 aaKnown RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF432O94892 652 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 IFNB1P01574 187 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 GSTA2P09210 222 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 STIP1P31948 543 aaKnown RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 TKTL1P51854 596 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 HNRNPFP52597 415 aaKnown RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 THOP1P52888 689 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 DLG1Q12959 904 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 SNTA1Q13424 505 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 PDE7AQ13946 482 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KRT81Q14533 505 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 OPCMLQ14982 345 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 ITPRIPL2Q3MIP1 535 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 FASTKD1Q53R41 847 aaKnown RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 TAF1BQ53T94 588 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 C12orf60Q5U649 245 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 AGAP6Q5VW22 663 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 OR6B2Q6IFH4 312 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 NEK5Q6P3R8 708 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 ABRAXAS1Q6UWZ7 409 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 ISLR2Q6UXK2 745 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KCTD8Q6ZWB6 473 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 GPR141Q7Z602 305 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 EID3Q8N140 333 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 PRSS35Q8N3Z0 413 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 OR4C15Q8NGM1 316 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 OR10Q1Q8NGQ4 319 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 RNASE8Q8TDE3 154 aaKnown RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 GGHQ92820 318 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 FAM46BQ96A09 425 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 CAPNS2Q96L46 248 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 UBAC1Q9BSL1 405 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 SLC39A8Q9C0K1 460 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 FAM49AQ9H0Q0 323 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-217ENST00000541578 RAB17Q9H0T7 212 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 TSPYL1Q9H0U9 437 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 DPEP2Q9H4A9 486 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 C10orf88Q9H8K7 445 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 NGBQ9NPG2 151 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 FGF21Q9NSA1 209 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 P4HTMQ9NXG6 502 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 NDUFA13Q9P0J0 144 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 TRIM10Q9UDY6 481 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KCNG2Q9UJ96 466 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 PLA2G4CQ9UP65 541 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 PFASO15067 1338 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 FANCIQ9NVI1 1328 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 MON2Q7Z3U7 1717 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 KIAA1551Q9HCM1 1747 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 RTL1A6NKG5 1358 aa3.86□□□□□ -1.79
SNHG1-217ENST00000541578 DOCK7Q96N67 2140 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 A0A087X0K7 114 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM129A0AVI4 362 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 MACROD2A1Z1Q3 448 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 PIGNO95427 931 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TGFAP01135 160 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 SERPINB2P05120 415 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 FAM200BP0CF97 657 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 EZRP15311 586 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 CHRNA3P32297 505 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 EPHX2P34913 555 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 NSFP46459 744 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 OR3A3P47888 321 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 GLIPR1P48060 266 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 PRKCEQ02156 737 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 RUNX1T1Q06455 604 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 KARSQ15046 597 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF542PQ5EBM4 170 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 FGD3Q5JSP0 725 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 SIRPB2Q5JXA9 342 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 SLC35D3Q5M8T2 416 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 RAET1GQ6H3X3 334 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 WBP2NLQ6ICG8 309 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms