RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PKP4Q99569 1192 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLC30A2Q9BRI3 323 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 TAPBPLQ9BX59 468 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 FAM8A1Q9UBU6 413 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 FTSJ1Q9UET6 329 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 TRAPPC4Q9Y296 219 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 ARRDC5A6NEK1 342 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 CTDSP2O14595 271 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 GPR37L1O60883 481 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 GADD45GO95257 159 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLC16A8O95907 504 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 CXCL10P02778 98 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 IMPA1P29218 277 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 TIE1P35590 1138 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLC15A1P46059 708 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPC1-202ENST00000540608 ZNF648Q5T619 568 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLCO4C1Q6ZQN7 724 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 HSD11B1LQ7Z5J1 315 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 AQP11Q8NBQ7 271 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 FOXJ1Q92949 421 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 TIFAQ96CG3 184 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 REPS1Q96D71 796 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 KCNS3Q9BQ31 491 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 NEK6Q9HC98 313 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 MRPL17Q9NRX2 175 aaKnown RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 OGDHLQ9ULD0 1010 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 KCNE2Q9Y6J6 123 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PDZK1P1A8MUH7 402 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 ZNF197O14709 1029 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 NPC1O15118 1278 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 GPX5O75715 221 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CCNKO75909 580 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 GASTP01350 101 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CKMP06732 381 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 FURINP09958 794 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PIPP12273 146 aaPredicted RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 ZNF30P17039 623 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 RHCEP18577 417 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CD72P21854 359 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 GABRR2P28476 465 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 HLA-FP30511 346 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CRISP1P54107 249 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PNLIPRP1P54315 467 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PCBP3P57721 371 aaKnown RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 PDE7AQ13946 482 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SSX1Q16384 188 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 FRMPD2BQ6IN97 320 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 KLHL17Q6TDP4 642 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SPATC1Q76KD6 591 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 OTOP2Q7RTS6 562 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 TCEAL8Q8IYN2 117 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CLIP4Q8N3C7 705 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CHST14Q8NCH0 376 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CAPSLQ8WWF8 208 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CIDECQ96AQ7 238 aaPredicted RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 TMEM159Q96B96 161 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CEP19Q96LK0 163 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SAMD11Q96NU1 681 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 YIPF2Q9BWQ6 316 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 ROGDIQ9GZN7 287 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 FAM47E-STBD1D6RA91 191 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 QSOX1O00391 747 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 RGS13O14921 159 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 CNR2P34972 360 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 RPL3P39023 403 aaKnown RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 BDKRB1P46663 353 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 DCDC1P59894 354 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SLC7A9P82251 487 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 RNF130Q86XS8 419 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
NPC1-202ENST00000540608 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 WDR36Q8NI36 951 aaKnown RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 NEIL2Q969S2 332 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 PPCDCQ96CD2 204 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 TP63Q9H3D4 680 aaPredicted RBP11.76□□□□□ -0.53
NPC1-202ENST00000540608 ACSL6Q9UKU0 697 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 MAP4K5Q9Y4K4 846 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 SNX8Q9Y5X2 465 aa11.76□□□□□ -0.53
NPC1-202ENST00000540608 FADS2P1A8MWK0 482 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 FOXE1O00358 373 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 GRM6O15303 877 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TSPAN6O43657 245 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 SLITRK5O94991 958 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 CYP2A6P11509 494 aaPredicted RBP11.75□□□□□ -0.53
NPC1-202ENST00000540608 GJA1P17302 382 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 VIPR1P32241 457 aa11.75□□□□□ -0.53
NPC1-202ENST00000540608 TNFSF8P32971 234 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms