RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TRADDQ15628 312 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.77■□□□□ 0.922e-10■□□□□ 8.9
SCARB1-206ENST00000539320 PAGE2BQ5JRK9 111 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 ADNP2Q6IQ32 1131 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 RAPH1Q70E73 1250 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 FAM47BQ8NA70 645 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 FAM98AQ8NCA5 519 aaKnown RBP20.77■□□□□ 0.92
SCARB1-206ENST00000539320 FBF1Q8TES7 1133 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 FRMD6Q96NE9 622 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 ALG9Q9H6U8 611 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 COPS7BQ9H9Q2 264 aaPredicted RBP20.77■□□□□ 0.92
SCARB1-206ENST00000539320 PRTFDC1Q9NRG1 225 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 SUCOQ9UBS9 1254 aaKnown RBP20.77■□□□□ 0.92
SCARB1-206ENST00000539320 MRPS33Q9Y291 106 aaKnown RBP20.77■□□□□ 0.92
SCARB1-206ENST00000539320 TEX15Q9BXT5 2789 aa20.77■□□□□ 0.92
SCARB1-206ENST00000539320 MLYCDO95822 493 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 TFEBP19484 476 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 CERS1P27544 350 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 CRABP2P29373 138 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 IRF8Q02556 426 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 LAPTM5Q13571 262 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF468Q5VIY5 522 aaPredicted RBP20.76■□□□□ 0.91
SCARB1-206ENST00000539320 SLC25A25Q6KCM7 469 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 ABHD17CQ6PCB6 329 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 GALNTL5Q7Z4T8 443 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 TBC1D1Q86TI0 1168 aaPredicted RBP20.76■□□□□ 0.91
SCARB1-206ENST00000539320 B3GNT7Q8NFL0 401 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 STAG3L4Q8TBR4 150 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 SERINC2Q96SA4 455 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 DEFB126Q9BYW3 111 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 NMRAL1Q9HBL8 299 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 ASB1Q9Y576 335 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 PCNX1Q96RV3 2341 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 CENPEQ02224 2701 aa20.76■□□□□ 0.91
SCARB1-206ENST00000539320 TRBV11-1A0A0K0K1C0 115 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 SUPT3HB4E1H0 165 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CLDN4O14493 209 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 KERAO60938 352 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 SUPT3HO75486 399 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 SLC25A12O75746 678 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 MYO1DO94832 1006 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 SP1P08047 785 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 EPORP19235 508 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CA7P43166 264 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 HNRNPFP52597 415 aaKnown RBP20.75■□□□□ 0.91
SCARB1-206ENST00000539320 MTTPP55157 894 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 HSD17B7P56937 341 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 ALDH6A1Q02252 535 aaKnown RBP20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CKAP4Q07065 602 aaKnown RBP20.75■□□□□ 0.91
SCARB1-206ENST00000539320 TGM3Q08188 693 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 DLG1Q12959 904 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CHIT1Q13231 466 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 TBCCQ15814 346 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF595Q8IYB9 648 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 APCDD1LQ8NCL9 501 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 UBTD2Q8WUN7 234 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 GPR137Q96N19 417 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CD244Q9BZW8 370 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 ZNF490Q9ULM2 529 aaPredicted RBP20.75■□□□□ 0.91
SCARB1-206ENST00000539320 CLDN16Q9Y5I7 305 aa20.75■□□□□ 0.91
SCARB1-206ENST00000539320 ESYT3A0FGR9 886 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 TGFBR3LH3BV60 316 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 FCHO1O14526 889 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 LTA4HP09960 611 aaKnown RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 CYB561P49447 251 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 CLCN2P51788 898 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 SLC13A2Q13183 592 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 RCN2Q14257 317 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 HIST2H2ACQ16777 129 aaPredicted RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 HIST2H2AA3Q6FI13 130 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 ISCA2Q86U28 154 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 ARMC10Q8N2F6 343 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 TMEM52Q8NDY8 209 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 THAP3Q8WTV1 239 aaPredicted RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 ATOH8Q96SQ7 321 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 CSF3RQ99062 836 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 TSPAN10Q9H1Z9 355 aaPredicted RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 TRIM45Q9H8W5 580 aaPredicted RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 ADAP2Q9NPF8 381 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 PNO1Q9NRX1 252 aaKnown RBP20.74■□□□□ 0.91
SCARB1-206ENST00000539320 IGSF5Q9NSI5 407 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 SH3BGRL2Q9UJC5 107 aa20.74■□□□□ 0.91
SCARB1-206ENST00000539320 SYNDIG1LA6NDD5 238 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 UBXN8O00124 270 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 NME2P1O60361 137 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 SLC19A2O60779 497 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 NME2P22392 152 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 PPP2R1BP30154 601 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 TRHRP34981 398 aaPredicted RBP20.73■□□□□ 0.91
SCARB1-206ENST00000539320 MSH2P43246 934 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 KCNC1P48547 511 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 HLCSP50747 726 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 CASP6P55212 293 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 LIM2P55344 173 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 GUCY2DQ02846 1103 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 E2F2Q14209 437 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 MAPKAPK3Q16644 382 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 C8orf74Q6P047 294 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 UBE2E3Q969T4 207 aa20.73■□□□□ 0.91
SCARB1-206ENST00000539320 TMEM125Q96AQ2 219 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms