RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 RAB38P57729 211 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 OR4D2P58180 307 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 BTG2P78543 158 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TGM3Q08188 693 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 LGSNQ5TDP6 509 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 UBE3DQ7Z6J8 389 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 SCUBE1Q8IWY4 988 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 CISD2Q8N5K1 135 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 LRRN4CLQ8ND94 238 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 UHMK1Q8TAS1 419 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 ELP5Q8TE02 316 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 MTBPQ96DY7 904 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 C19orf60Q96EN9 201 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 KCNC2Q96PR1 638 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 F2RL3Q96RI0 385 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TBCDQ9BTW9 1192 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 ROGDIQ9GZN7 287 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 EPB41L4BQ9H329 900 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 ASF1BQ9NVP2 202 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TEKT2Q9UIF3 430 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 DAPP1Q9UN19 280 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 CLDN16Q9Y5I7 305 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 A0A0G2JN53 185 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 SYNDIG1LA6NDD5 238 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 TCP11X1B4DZS4 312 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 H0YIV9 168 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 STX16-NPEPL1H3BU86 382 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 CYR61O00622 381 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 CDK2AP1O14519 115 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 STX16O14662 325 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 SLC26A5P58743 744 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 SRSF1Q07955 248 aaKnown RBP eCLIP16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 ACTN3Q08043 901 aaPredicted RBP16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 GTF2H2Q13888 395 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 TERF2Q15554 542 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 GTF2H2CQ6P1K8 395 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 ZNF595Q8IYB9 648 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 TMEM151AQ8N4L1 468 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 L3MBTL4Q8NA19 623 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 CMTM7Q96FZ5 175 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 MRPL57Q9BQC6 102 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 SLC29A3Q9BZD2 475 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 NECTIN3Q9NQS3 549 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 KCMF1Q9P0J7 381 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 CPSF2Q9P2I0 782 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 XPR1Q9UBH6 696 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 NTNG1Q9Y2I2 539 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 ANGPTL3Q9Y5C1 460 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 PCDHGA11Q9Y5H2 935 aa16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 COPG1Q9Y678 874 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-205ENST00000537164 LRRC14BA6NHZ5 514 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 SIX3O95343 332 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 WDPCPO95876 746 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 MAOAP21397 527 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 CERS1P27544 350 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 LIM2P55344 173 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ARG2P78540 354 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 SLC29A2Q14542 456 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ACER2Q5QJU3 275 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 DEPDC1Q5TB30 811 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ABHD17BQ5VST6 288 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ZNF793Q6ZN11 406 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 CHSY3Q70JA7 882 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 GOLGA7Q7Z5G4 137 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 LGI4Q8N135 537 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ARMC10Q8N2F6 343 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 CATSPER1Q8NEC5 780 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ARMC2Q8NEN0 867 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 NFAM1Q8NET5 270 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 CNDP1Q96KN2 507 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 ZNF354BQ96LW1 612 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 NPAS2Q99743 824 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 MRPL46Q9H2W6 279 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 IPPKQ9H8X2 491 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 LYRM4Q9HD34 91 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 STMN3Q9NZ72 180 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 PPT2Q9UMR5 302 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 PPIEQ9UNP9 301 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 MRPS33Q9Y291 106 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 POLEQ07864 2286 aa16.12■□□□□ 0.17
SFSWAP-205ENST00000537164 DOPEY2Q9Y3R5 2298 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 TRAV17A0A0B4J275 112 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 OR5H15A6NDH6 313 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 SAGE2PA6NJ88 616 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 CLDN4O14493 209 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 CBX6O95503 412 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 SBK3P0C264 359 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 GNLYP22749 145 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 ATP5A1P25705 553 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 TNFRSF8P28908 595 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 UBAP2LQ14157 1087 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 RCN2Q14257 317 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 INAQ16352 499 aa16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 KHDRBS2Q5VWX1 349 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-205ENST00000537164 PTGR2Q8N8N7 351 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms