RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RASGRP1O95267 797 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 THP07101 528 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 LPOP22079 712 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ALAS2P22557 587 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CLEC12AQ5QGZ9 265 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 BCL2L15Q5TBC7 163 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 NCEH1Q6PIU2 408 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SMARCD3Q6STE5 483 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CERS5Q8N5B7 392 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C2CD4AQ8NCU7 369 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 OR13C4Q8NGS5 318 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 OR5J2Q8NH18 312 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 AHCYL2Q96HN2 611 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C12orf66Q96MD2 445 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF350Q9GZX5 532 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 KCTD3Q9Y597 815 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 LEUTXA8MZ59 168 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ANKRD28O15084 1053 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SGCEO43556 437 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CDK1P06493 297 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 PROS1P07225 676 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 DARSP14868 501 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CAPN3P20807 821 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 HMGCLP35914 325 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 POLR2IP36954 125 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 RAB5BP61020 215 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GPR68Q15743 365 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 PAQR3Q6TCH7 311 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CATSPERGQ6ZRH7 1159 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 B3GNT8Q7Z7M8 397 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ZFAND4Q86XD8 727 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 PGBD3Q8N328 593 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ST8SIA2Q92186 375 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF436Q9C0F3 470 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GOLGA2P5Q9HBQ8 144 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ABCA3Q99758 1704 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 LOC100509620A0A075B734 347 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C17orf102A2RUQ5 167 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 STK16O75716 305 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 RAF1P04049 648 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 S100A2P29034 98 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MMP12P39900 470 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CD96P40200 585 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 HK3P52790 923 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GPLD1P80108 840 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 DACT2Q5SW24 774 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MTSS1LQ765P7 747 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 AQP11Q8NBQ7 271 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 FANK1Q8TC84 345 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C15orf40Q8WUR7 153 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 RNF170Q96K19 258 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 NDRG3Q9UGV2 375 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 FKBPLQ9UIM3 349 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SBF2Q86WG5 1849 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 TEX46H3BTG2 121 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 PITPNM1O00562 1244 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MATN3O15232 486 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 HRO43593 1189 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ADAM11O75078 769 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 TPOP07202 933 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GAAP10253 952 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SYN1P17600 705 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 OGNP20774 298 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CYP2B6P20813 491 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CLCN4P51793 760 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 C2orf80Q0P641 193 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 FGL2Q14314 439 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CD276Q5ZPR3 534 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 BTLAQ7Z6A9 289 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 LINC00518Q8N0U6 118 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CRYBG2Q8N1P7 616 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ARFGAP1Q8N6T3 406 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 TTLQ8NG68 377 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 OR5AK3PQ8NH89 298 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MOSPD2Q8NHP6 518 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GPR151Q8TDV0 419 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ADAMTS14Q8WXS8 1223 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SENP8Q96LD8 212 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SIGLEC11Q96RL6 698 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MGLLQ99685 303 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MED18Q9BUE0 208 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SPATA5L1Q9BVQ7 753 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 TSSK6Q9BXA6 273 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SLC19A3Q9BZV2 496 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 BRD9Q9H8M2 597 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 BIN3Q9NQY0 253 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 DCAF13Q9NV06 445 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GULP1Q9UBP9 304 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ASF1AQ9Y294 204 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 GPR45Q9Y5Y3 372 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 FER1L6Q2WGJ9 1857 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PQ09 198 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 AKAP8O43823 692 aaKnown RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF14P17017 642 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 BMP7P18075 431 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 WEE1P30291 646 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 MNDAP41218 407 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 PER3P56645 1201 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 ERVK-21P61565 698 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms