RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 IL1RAPQ9NPH3 570 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 THUMPD1Q9NXG2 353 aaKnown RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 IFT80Q9P2H3 777 aaPredicted RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 CA5BQ9Y2D0 317 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 DOCK9Q9BZ29 2069 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 PDLIM1O00151 329 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 UPK1AO00322 258 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 HAT1O14929 419 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 ZW10O43264 779 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 NOBOXO60393 691 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 VIPP01282 170 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 MYF6P23409 242 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 CRATP43155 626 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 PRIM2P49643 509 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 RGS1Q08116 209 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 PLCL1Q15111 1095 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 MPEG1Q2M385 716 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 RFX4Q33E94 735 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 SLC36A3Q495N2 470 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 IYDQ6PHW0 289 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 PIWIL3Q7Z3Z3 882 aaKnown RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 NRROSQ86YC3 692 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 ADGRF3Q8IZF5 1079 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 FBXL6Q8N531 539 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 DHRSXQ8N5I4 330 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 FAM86B1Q8N7N1 296 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 FLCNQ8NFG4 579 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 OR5K1Q8NHB7 308 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 ZFP28Q8NHY6 868 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 MAGEE2Q8TD90 523 aaPredicted RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 CIDECQ96AQ7 238 aaPredicted RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 LMAN1LQ9HAT1 526 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
BEST1-208ENST00000534553 SPHK1Q9NYA1 384 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 UBAP1Q9NZ09 502 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 USE1Q9NZ43 259 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 ZNF451Q9Y4E5 1061 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
BEST1-208ENST00000534553 DPPA5A6NC42 116 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 URADA6NGE7 173 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 RTCAO00442 366 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 TNFSF14O43557 240 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 TNFRSF21O75509 655 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 ZNF682O95780 498 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 NTRK1P04629 796 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 FABP3P05413 133 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 SERPIND1P05546 499 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 HIST1H1TP22492 207 aaPredicted RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 MVDP53602 400 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 MANFP55145 182 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
BEST1-208ENST00000534553 KIAA1614Q5VZ46 1190 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 TMEM214Q6NUQ4 689 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 ABHD17CQ6PCB6 329 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 CCDC80Q76M96 950 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 UBE3DQ7Z6J8 389 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 PARGQ86W56 976 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 PAQR7Q86WK9 346 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 ZDHHC21Q8IVQ6 265 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 CLEC4FQ8N1N0 589 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 PSMA8Q8TAA3 256 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 PNPT1Q8TCS8 783 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 LZICQ8WZA0 190 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 NRTNQ99748 197 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 SORBS1Q9BX66 1292 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 MRPS26Q9BYN8 205 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 TM9SF3Q9HD45 589 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 LYARQ9NX58 379 aaKnown RBP12.75□□□□□ -0.37
BEST1-208ENST00000534553 NDUFA13Q9P0J0 144 aa12.75□□□□□ -0.37
BEST1-208ENST00000534553 OR2A25A4D2G3 310 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 DLGAP1O14490 977 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ERI3O43414 337 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 SUV39H1O43463 412 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 E2F6O75461 281 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 EML2O95834 649 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ALBP02768 609 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 MT-ND1P03886 318 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SEMG1P04279 462 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ALPLP05186 524 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SLC35G6P0C7Q6 338 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SOAT1P35610 550 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 CAPGP40121 348 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ALDH9A1P49189 494 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PLA2G16P53816 162 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 MLLT1Q03111 559 aaPredicted RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 NKG7Q16617 165 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SLC5A12Q1EHB4 618 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PLD3Q8IV08 490 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 NAGSQ8N159 534 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms