RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 PTGS2P35354 604 aa21.31■■□□□ 1
PKP3-210ENST00000533249 KRTAP10-9P60411 292 aa21.31■■□□□ 1
PKP3-210ENST00000533249 GPR85P60893 370 aa21.31■■□□□ 1
PKP3-210ENST00000533249 STXBP1P61764 594 aaKnown RBP21.31■■□□□ 1
PKP3-210ENST00000533249 RUNX2Q13950 521 aa21.31■■□□□ 1
PKP3-210ENST00000533249 C18orf21Q32NC0 220 aaPredicted RBP21.31■■□□□ 1
PKP3-210ENST00000533249 STEAP4Q687X5 459 aa21.31■■□□□ 1
PKP3-210ENST00000533249 CD163Q86VB7 1156 aa21.31■■□□□ 1
PKP3-210ENST00000533249 ANKMY2Q8IV38 441 aa21.31■■□□□ 1
PKP3-210ENST00000533249 NOA1Q8NC60 698 aaKnown RBP21.31■■□□□ 1
PKP3-210ENST00000533249 GAL3ST3Q96A11 431 aa21.31■■□□□ 1
PKP3-210ENST00000533249 COQ3Q9NZJ6 369 aa21.31■■□□□ 1
PKP3-210ENST00000533249 TEX264Q9Y6I9 313 aa21.31■■□□□ 1
PKP3-210ENST00000533249 FAM95CA0A1B0GW59 222 aa21.3■■□□□ 1
PKP3-210ENST00000533249 ERI3O43414 337 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 H2AFYO75367 372 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 C1GALT1C1LP0DN25 315 aa21.3■■□□□ 1
PKP3-210ENST00000533249 GDF5P43026 501 aa21.3■■□□□ 1
PKP3-210ENST00000533249 SLBPQ14493 270 aaKnown RBP eCLIP21.3■■□□□ 1
PKP3-210ENST00000533249 MORF4L2Q15014 288 aa21.3■■□□□ 1
PKP3-210ENST00000533249 TSNQ15631 228 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 GLE1Q53GS7 698 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 MEX3BQ6ZN04 569 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 FRA10AC1Q70Z53 315 aa21.3■■□□□ 1
PKP3-210ENST00000533249 MDGA2Q7Z553 956 aa21.3■■□□□ 1
PKP3-210ENST00000533249 FAM57AQ8TBR7 257 aa21.3■■□□□ 1
PKP3-210ENST00000533249 CHTF18Q8WVB6 975 aa21.3■■□□□ 1
PKP3-210ENST00000533249 NCLNQ969V3 563 aa21.3■■□□□ 1
PKP3-210ENST00000533249 SPOCK3Q9BQ16 436 aa21.3■■□□□ 1
PKP3-210ENST00000533249 RAB17Q9H0T7 212 aa21.3■■□□□ 1
PKP3-210ENST00000533249 PRTFDC1Q9NRG1 225 aa21.3■■□□□ 1
PKP3-210ENST00000533249 CTNNAL1Q9UBT7 734 aa21.3■■□□□ 1
PKP3-210ENST00000533249 ZNF223Q9UK11 482 aaPredicted RBP21.3■■□□□ 1
PKP3-210ENST00000533249 UTP11Q9Y3A2 253 aaKnown RBP21.3■■□□□ 1
PKP3-210ENST00000533249 OARD1Q9Y530 152 aa21.3■■□□□ 1
PKP3-210ENST00000533249 TACC2O95359 2948 aa21.29■■□□□ 1
PKP3-210ENST00000533249 EFCAB8A8MWE9 144 aa21.29■■□□□ 1
PKP3-210ENST00000533249 TGFBR3LH3BV60 316 aa21.29■■□□□ 1
PKP3-210ENST00000533249 RAD51CO43502 376 aa21.29■■□□□ 1
PKP3-210ENST00000533249 GNAZP19086 355 aa21.29■■□□□ 1
PKP3-210ENST00000533249 HNRNPH1P31943 449 aaKnown RBP21.29■■□□□ 1
PKP3-210ENST00000533249 HNRNPFP52597 415 aaKnown RBP21.29■■□□□ 1
PKP3-210ENST00000533249 TAS2R39P59534 338 aa21.29■■□□□ 1
PKP3-210ENST00000533249 MRPS25P82663 173 aaKnown RBP21.29■■□□□ 1
PKP3-210ENST00000533249 CDKL1Q00532 357 aa21.29■■□□□ 1
PKP3-210ENST00000533249 MGAT5Q09328 741 aa21.29■■□□□ 1
PKP3-210ENST00000533249 SLC13A2Q13183 592 aa21.29■■□□□ 1
PKP3-210ENST00000533249 CMPK2Q5EBM0 449 aa21.29■■□□□ 1
PKP3-210ENST00000533249 TMIGD1Q6UXZ0 262 aa21.29■■□□□ 1
PKP3-210ENST00000533249 SLCO4C1Q6ZQN7 724 aa21.29■■□□□ 1
PKP3-210ENST00000533249 CEP128Q6ZU80 1094 aa21.29■■□□□ 1
PKP3-210ENST00000533249 ZC3HC1Q86WB0 502 aaKnown RBP21.29■■□□□ 1
PKP3-210ENST00000533249 SCUBE1Q8IWY4 988 aa21.29■■□□□ 1
PKP3-210ENST00000533249 FAM47BQ8NA70 645 aa21.29■■□□□ 1
PKP3-210ENST00000533249 TMEM52Q8NDY8 209 aa21.29■■□□□ 1
PKP3-210ENST00000533249 ANKRD49Q8WVL7 239 aa21.29■■□□□ 1
PKP3-210ENST00000533249 ANKRD7Q92527 254 aa21.29■■□□□ 1
PKP3-210ENST00000533249 LRRC39Q96DD0 335 aa21.29■■□□□ 1
PKP3-210ENST00000533249 VMP1Q96GC9 406 aa21.29■■□□□ 1
PKP3-210ENST00000533249 CCDC77Q9BR77 488 aa21.29■■□□□ 1
PKP3-210ENST00000533249 LRRC1Q9BTT6 524 aa21.29■■□□□ 1
PKP3-210ENST00000533249 CLDN4O14493 209 aa21.28■■□□□ 1
PKP3-210ENST00000533249 PDE9AO76083 593 aa21.28■■□□□ 1
PKP3-210ENST00000533249 RHOXF2BP0C7M4 288 aa21.28■■□□□ 1
PKP3-210ENST00000533249 TFEBP19484 476 aa21.28■■□□□ 1
PKP3-210ENST00000533249 HNMTP50135 292 aa21.28■■□□□ 1
PKP3-210ENST00000533249 SSR4P51571 173 aa21.28■■□□□ 1
PKP3-210ENST00000533249 ARL4CP56559 192 aa21.28■■□□□ 1
PKP3-210ENST00000533249 RAB38P57729 211 aa21.28■■□□□ 1
PKP3-210ENST00000533249 TLE4Q04727 773 aa21.28■■□□□ 1
PKP3-210ENST00000533249 TERF2Q15554 542 aa21.28■■□□□ 1
PKP3-210ENST00000533249 C16orf47Q6ZP98 133 aaPredicted RBP21.28■■□□□ 1
PKP3-210ENST00000533249 KLHDC8AQ8IYD2 350 aa21.28■■□□□ 1
PKP3-210ENST00000533249 LRRN4CLQ8ND94 238 aa21.28■■□□□ 1
PKP3-210ENST00000533249 C16orf52Q8NHV5 167 aa21.28■■□□□ 1
PKP3-210ENST00000533249 SREK1Q8WXA9 508 aaKnown RBP21.28■■□□□ 1
PKP3-210ENST00000533249 MS4A6EQ96DS6 147 aa21.28■■□□□ 1
PKP3-210ENST00000533249 C14orf79Q96F83 325 aa21.28■■□□□ 1
PKP3-210ENST00000533249 RHOXF2Q9BQY4 288 aa21.28■■□□□ 1
PKP3-210ENST00000533249 ENKD1Q9H0I2 346 aa21.28■■□□□ 1
PKP3-210ENST00000533249 LIN28AQ9H9Z2 209 aaKnown RBP21.28■■□□□ 1
PKP3-210ENST00000533249 KCMF1Q9P0J7 381 aa21.28■■□□□ 1
PKP3-210ENST00000533249 ERVK-11Q9UQG0 969 aa21.28■■□□□ 1
PKP3-210ENST00000533249 ADGRG4Q8IZF6 3080 aa21.27■■□□□ 1
PKP3-210ENST00000533249 LRIT2A6NDA9 550 aa21.27■■□□□ 1
PKP3-210ENST00000533249 NCF1BA6NI72 391 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 NCF1CA8MVU1 366 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 B3GALT2O43825 422 aa21.27■■□□□ 1
PKP3-210ENST00000533249 PRKNO60260 465 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 NCF1P14598 390 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 PLA2G16P53816 162 aa21.27■■□□□ 1
PKP3-210ENST00000533249 HSD17B7P56937 341 aa21.27■■□□□ 1
PKP3-210ENST00000533249 CLNKQ7Z7G1 428 aa21.27■■□□□ 1
PKP3-210ENST00000533249 ADAMTSL2Q86TH1 951 aa21.27■■□□□ 1
PKP3-210ENST00000533249 ZFP62Q8NB50 900 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 TTLQ8NG68 377 aa21.27■■□□□ 1
PKP3-210ENST00000533249 RHBDF1Q96CC6 855 aa21.27■■□□□ 1
PKP3-210ENST00000533249 NPLQ9BXD5 320 aaPredicted RBP21.27■■□□□ 1
PKP3-210ENST00000533249 TRIM31Q9BZY9 425 aa21.27■■□□□ 1
PKP3-210ENST00000533249 TIMMDC1Q9NPL8 285 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms