RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ZUFSPQ96AP4 578 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 ZNF514Q96K75 400 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 GAL3ST4Q96RP7 486 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 DCSTAMPQ9H295 470 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 TREX1Q9NSU2 369 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 RDH8Q9NYR8 311 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 VAPAQ9P0L0 249 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 APC2O95996 2303 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 H3BSH0 61 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ANXA8P13928 327 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 PTGER1P34995 402 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 CCR8P51685 355 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ZNF155Q12901 538 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 NCEH1Q6PIU2 408 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 RFLNAQ6ZTI6 216 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 PDPRQ8NCN5 879 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 GPR26Q8NDV2 337 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 OR10H4Q8NGA5 316 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 FRS2Q8WU20 508 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 IPCEF1Q8WWN9 437 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 APIPQ96GX9 242 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 SLC29A3Q9BZD2 475 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 COLEC10Q9Y6Z7 277 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 H7C2Y5 167 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 FPR1P21462 350 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 IL18Q14116 193 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 IQCCQ4KMZ1 466 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 OGFRL1Q5TC84 451 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 TMPRSS11AQ6ZMR5 421 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 NUDT13Q86X67 352 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 DTWD1Q8N5C7 304 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 MINDY1Q8N5J2 469 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 PACRGLQ8N7B6 248 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 C11orf24Q96F05 449 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 F2RL3Q96RI0 385 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ZNF347Q96SE7 839 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 MGME1Q9BQP7 344 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 SDR39U1Q9NRG7 319 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 PCDHB3Q9Y5E6 796 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 SOCS5O75159 536 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ENPP1P22413 925 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 BTN3A2P78410 334 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 DEFB103AP81534 67 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 FOXM1Q08050 763 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 RTL4Q6ZR62 310 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 MARVELD2Q8N4S9 558 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ZNF563Q8TA94 476 aa11.78□□□□□ -0.52
BDNF-218ENST00000533246 ZNF641Q96N77 438 aaPredicted RBP11.78□□□□□ -0.52
BDNF-218ENST00000533246 FAM86C2PA6NEL3 165 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 PRSS44E7EML9 344 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 MATN4O95460 622 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 FGF19O95750 216 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 KLKB1P03952 638 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 LAMP1P11279 417 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 TYRP1P17643 537 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 BTN1A1Q13410 526 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 CDONQ4KMG0 1287 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 SLC5A11Q8WWX8 675 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 DNAJA3Q96EY1 480 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 CMTM7Q96FZ5 175 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 INPP5KQ9BT40 448 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 POPDC3Q9HBV1 291 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 MCCC2Q9HCC0 563 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 PPIEQ9UNP9 301 aaKnown RBP11.77□□□□□ -0.52
BDNF-218ENST00000533246 GLI3P10071 1580 aa11.77□□□□□ -0.52
BDNF-218ENST00000533246 YKT6O15498 198 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 RB1P06400 928 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 ETFAP13804 333 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 PRKCAP17252 672 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 CSNK2A2P19784 350 aaPredicted RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 XKP51811 444 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 EMP3P54852 163 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 MLLT10P55197 1068 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 RACK1P63244 317 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 RAB39AQ14964 217 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 QPRTQ15274 297 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 SLC35F1Q5T1Q4 408 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 RETREG3Q86VR2 466 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 LSMEM2Q8N112 164 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 PGBD5Q8N414 524 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 COX18Q8N8Q8 333 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 FAM46DQ8NEK8 389 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 OR9A1PQ8NGU1 263 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 FANK1Q8TC84 345 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 SMPDL3AQ92484 453 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 RANBP9Q96S59 729 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 BARD1Q99728 777 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 C11orf49Q9H6J7 331 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 ALDOCP09972 364 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 SRCP12931 536 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 PTX3P26022 381 aaPredicted RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 CRISP3P54108 245 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms