RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MTERF1Q99551 399 aaKnown RBP19.24■□□□□ 0.67
CCS-208ENST00000533244 OR51B5Q9H339 312 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 SEMA4BQ9NPR2 832 aaPredicted RBP19.24■□□□□ 0.67
CCS-208ENST00000533244 DAPP1Q9UN19 280 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 SPENQ96T58 3664 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 FAM227AF5H4B4 570 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 G3V2L1 256 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 PSMD12O00232 456 aaPredicted RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 FOXE1O00358 373 aaPredicted RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 PPP6CO00743 305 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 B4GALT2O60909 372 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 OTCP00480 354 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 SERPINA7P05543 415 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 IMPDH1P20839 514 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 ATP5A1P25705 553 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 TSFMP43897 325 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 CCT5P48643 541 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 CDH13P55290 713 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 LIM2P55344 173 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 RPS13P62277 151 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 CLCQ05315 142 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 DDX39BQ13838 428 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 NSDHLQ15738 373 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 IGFL3Q6UXB1 125 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 KBTBD2Q8IY47 623 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 OR4F6Q8NGB9 312 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 PSMF1Q92530 271 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 THOC3Q96J01 351 aaKnown RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 TMEM109Q9BVC6 243 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 COPS7BQ9H9Q2 264 aaPredicted RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 MKS1Q9NXB0 559 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 KCMF1Q9P0J7 381 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 ZNF225Q9UK10 706 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 GRID1Q9ULK0 1009 aa19.23■□□□□ 0.67
CCS-208ENST00000533244 HEMK1Q9Y5R4 338 aaPredicted RBP19.23■□□□□ 0.67
CCS-208ENST00000533244 TLDC2A0PJX2 215 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 RTCAO00442 366 aaKnown RBP19.22■□□□□ 0.67
CCS-208ENST00000533244 PLIN3O60664 434 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 ALPPP05187 535 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 PRR35P0CG20 571 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 KRT4P19013 534 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 HIST1H1TP22492 207 aaPredicted RBP19.22■□□□□ 0.67
CCS-208ENST00000533244 BTG2P78543 158 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 PHEXP78562 749 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 CUL3Q13618 768 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 CCDC153Q494R4 210 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 C10orf62Q5T681 223 aaPredicted RBP19.22■□□□□ 0.67
CCS-208ENST00000533244 LETMD1Q6P1Q0 360 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 IGFL2Q6UWQ7 119 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 ZYG11AQ6WRX3 759 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 RIPOR1Q6ZS17 1223 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 MILR1Q7Z6M3 343 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 ZNF605Q86T29 641 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 TRABD2AQ86V40 505 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 SCUBE1Q8IWY4 988 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 ACOT4Q8N9L9 421 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 MYRIPQ8NFW9 859 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 ZNF717Q9BY31 904 aaPredicted RBP19.22■□□□□ 0.67
CCS-208ENST00000533244 LYRM4Q9HD34 91 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 PRDM9Q9NQV7 894 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 MMACHCQ9Y4U1 282 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 CLDN16Q9Y5I7 305 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 SCN2AQ99250 2005 aa19.22■□□□□ 0.67
CCS-208ENST00000533244 IGHV3-20A0A0C4DH32 117 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 TCRBV16S1A1N1A0A5B0 115 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 CYR61O00622 381 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 PLPP1O14494 284 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 PRMT3O60678 531 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 DPM1O60762 260 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 SH3BGRLO75368 114 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 SEC24DO94855 1032 aaPredicted RBP19.21■□□□□ 0.67
CCS-208ENST00000533244 ETHE1O95571 254 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 TSPAN8P19075 237 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 PTX3P26022 381 aaPredicted RBP19.21■□□□□ 0.67
CCS-208ENST00000533244 CASRP41180 1078 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 IFFO1Q0D2I5 559 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 SFT2D3Q587I9 215 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 FRG2Q64ET8 278 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 PLAG1Q6DJT9 500 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 C4orf33Q8N1A6 199 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 RBMXL3Q8N7X1 1067 aaKnown RBP19.21■□□□□ 0.67
CCS-208ENST00000533244 TEX19Q8NA77 164 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 TMEM52Q8NDY8 209 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 RGMAQ96B86 450 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 CCDC126Q96EE4 140 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 PTCHD1Q96NR3 888 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 FRG2BQ96QU4 278 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 ZNF382Q96SR6 550 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 TRPS1Q9UHF7 1281 aa19.21■□□□□ 0.67
CCS-208ENST00000533244 SAP18O00422 153 aaKnown RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 COPEO14579 308 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 SUPT7LO94864 414 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 CELA2AP08217 269 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 ICAM2P13598 275 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 PLA2G2AP14555 144 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 SOX11P35716 441 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 SSR2P43308 183 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms