RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 LTBQ06643 244 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 RTL6Q6ICC9 239 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 NIPAL1Q6NVV3 410 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 KIAA0408Q6ZU52 694 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 CA13Q8N1Q1 262 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 NT5CQ8TCD5 201 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 CCT6BQ92526 530 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 NINJ1Q92982 152 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 NEIL2Q969S2 332 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 VMP1Q96GC9 406 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 FAR2Q96K12 515 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 TRIM54Q9BYV2 358 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 PRTFDC1Q9NRG1 225 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 DYRK1BQ9Y463 629 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
COPB1-209ENST00000533096 IGKV3D-11A0A0A0MRZ8 115 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 ZCWPW2A0A1B0GU75 182 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 URADA6NGE7 173 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 TMEM200CA6NKL6 621 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 CLDN4O14493 209 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 SOX3P41225 446 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 DNASE1L1P49184 302 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 MAN2A2P49641 1150 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
COPB1-209ENST00000533096 RUNX2Q13950 521 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 TRILQ7L0X0 811 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 RNF10Q8N5U6 811 aaKnown RBP12.1□□□□□ -0.47
COPB1-209ENST00000533096 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 ANKRD53Q8N9V6 530 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 CALML6Q8TD86 181 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 SLC5A11Q8WWX8 675 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 RASSF1Q9NS23 344 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 TAS2R13Q9NYV9 303 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 FAM215AQ9Y5M1 114 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 CLCA3PQ9Y6N3 262 aa12.1□□□□□ -0.47
COPB1-209ENST00000533096 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
COPB1-209ENST00000533096 PRRC2AP48634 2157 aaKnown RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 CPAMD8Q8IZJ3 1885 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 NRDCO43847 1150 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 H2AFYO75367 372 aaKnown RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 KRT14P02533 472 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 CDKN2DP55273 166 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 TIAL1Q01085 375 aaKnown RBP eCLIP12.09□□□□□ -0.47
COPB1-209ENST00000533096 RBM20Q5T481 1227 aaKnown RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 NDUFAF5Q5TEU4 345 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 ARMC10Q8N2F6 343 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 TRPV3Q8NET8 790 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 OR56A3Q8NH54 315 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 RASL10BQ96S79 203 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 AIF1LQ9BQI0 150 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 CLK4Q9HAZ1 481 aaKnown RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 SEMA4BQ9NPR2 832 aaPredicted RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
COPB1-209ENST00000533096 RPH3AQ9Y2J0 694 aaPredicted RBP12.09□□□□□ -0.47
COPB1-209ENST00000533096 OR14I1A6ND48 311 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TGFBR3LH3BV60 316 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 EIF3FO00303 357 aaPredicted RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 P04436 131 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 FOSL1P15407 271 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 ADSLP30566 484 aaPredicted RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 CXCR5P32302 372 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 AHRP35869 848 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 PIGAP37287 484 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 GPR143P51810 404 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 HNRNPFP52597 415 aaKnown RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 IL2P60568 153 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 CCZ1BP86790 482 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 CCZ1P86791 482 aaPredicted RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 KEAP1Q14145 624 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 LRRC8EQ6NSJ5 796 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 NXPE4Q6UWF7 544 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 HSDL2Q6YN16 418 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TAOK1Q7L7X3 1001 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TMPRSS11BQ86T26 416 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 THOC6Q86W42 341 aaKnown RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 TMEM132CQ8N3T6 1108 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 FAM109AQ8N4B1 249 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 ZNF321PQ8N8H1 164 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 FAM47BQ8NA70 645 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TMEM52Q8NDY8 209 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 WFDC11Q8NEX6 87 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 MAIP1Q8WWC4 291 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 SCYL1Q96KG9 808 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms