RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 WDR93Q6P2C0 686 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 PAPD4Q6PIY7 484 aaKnown RBP14.44□□□□□ -0.1
CPSF1-210ENST00000532935 Q6ZS92 163 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 CNPY4Q8N129 248 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 SRFBP1Q8NEF9 429 aaKnown RBP14.44□□□□□ -0.1
CPSF1-210ENST00000532935 CPT1CQ8TCG5 803 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 UBLCP1Q8WVY7 318 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-210ENST00000532935 CMTM7Q96FZ5 175 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 KCNC2Q96PR1 638 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 LPAR4Q99677 370 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 ILKAPQ9H0C8 392 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-210ENST00000532935 COPS7BQ9H9Q2 264 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-210ENST00000532935 PRDM9Q9NQV7 894 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 ADGRE2Q9UHX3 823 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 PCTPQ9UKL6 214 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 TSC22D4Q9Y3Q8 395 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 PCDHGA11Q9Y5H2 935 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 CSAG2Q9Y5P2 127 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 H0YIV9 168 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 OR7A17O14581 309 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 SH3BGRLO75368 114 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 TGFB1P01137 390 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 SHBGP04278 402 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 SBK3P0C264 359 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 H2AFXP16104 143 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 MAOAP21397 527 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 PIK3CBP42338 1070 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 DDX39BQ13838 428 aaKnown RBP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 INPP5JQ15735 1006 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 CPSF6Q16630 551 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 TMEM35AQ53FP2 167 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 PRR30Q53SZ7 412 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 CHSY3Q70JA7 882 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 UBE3DQ7Z6J8 389 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 CUZD1Q86UP6 607 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 LCA5Q86VQ0 697 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 RNF175Q8N4F7 328 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 TMEM151AQ8N4L1 468 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 L3MBTL4Q8NA19 623 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 OR52B6Q8NGF0 335 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 HUS1BQ8NHY5 278 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 M1APQ8TC57 530 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 ACMSDQ8TDX5 336 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 ADAMTS18Q8TE60 1221 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 REPS1Q96D71 796 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 TBCDQ9BTW9 1192 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 ROGDIQ9GZN7 287 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 CLMPQ9H6B4 373 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 NOL11Q9H8H0 719 aaKnown RBP14.43□□□□□ -0.1
CPSF1-210ENST00000532935 NECTIN3Q9NQS3 549 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 RNF11Q9Y3C5 154 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 MMACHCQ9Y4U1 282 aa14.43□□□□□ -0.1
CPSF1-210ENST00000532935 IGKV3D-11A0A0A0MRZ8 115 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 TCRBV16S1A1N1A0A5B0 115 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CCDC151A5D8V7 595 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 A8MT66 165 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 GOLGA8RI6L899 631 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 SAP18O00422 153 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 RTCAO00442 366 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ERLIN1O75477 346 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CLDN9O95484 217 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 RPS17P08708 135 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 PYGBP11216 843 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ARL1P40616 181 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CCNG1P51959 295 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 LIM2P55344 173 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 DEPDC1Q5TB30 811 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 KHDRBS2Q5VWX1 349 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 B3GNTL1Q67FW5 361 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ZNF793Q6ZN11 406 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 SCUBE1Q8IWY4 988 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 IQCKQ8N0W5 287 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CYP4X1Q8N118 509 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 FAM47BQ8NA70 645 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 TMEM52Q8NDY8 209 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ARMC2Q8NEN0 867 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CNDP1Q96KN2 507 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 NSUN5Q96P11 429 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CDK15Q96Q40 435 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 MTERF1Q99551 399 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 PARD6BQ9BYG5 372 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 OR51B5Q9H339 312 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 ZBTB26Q9HCK0 441 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 LYRM4Q9HD34 91 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 DMRT3Q9NQL9 472 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 TMEM216Q9P0N5 145 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.42□□□□□ -0.11e-7■■■□□ 15
CPSF1-210ENST00000532935 DAPP1Q9UN19 280 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 MRPS33Q9Y291 106 aaKnown RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 PCDHGA10Q9Y5H3 936 aa14.42□□□□□ -0.1
CPSF1-210ENST00000532935 V9GYY5 206 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-210ENST00000532935 CYR61O00622 381 aa14.41□□□□□ -0.1
CPSF1-210ENST00000532935 CLDN4O14493 209 aa14.41□□□□□ -0.1
CPSF1-210ENST00000532935 HIST1H1TP22492 207 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-210ENST00000532935 ATP5A1P25705 553 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms