RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CRTC1Q6UUV9 634 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ALKAL1Q6UXT8 129 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF557Q8N988 423 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CLRN3Q8NCR9 226 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 STAG3L4Q8TBR4 150 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR52E6Q96RD3 313 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 GPR22Q99680 433 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SMAD5Q99717 465 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SPOCK3Q9BQ16 436 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ERVK-6Q9BXR3 956 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SPNS1Q9H2V7 528 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CARS2Q9HA77 564 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MEAF6Q9HAF1 191 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SLAMF7Q9NQ25 335 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 KLHL1Q9NR64 748 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC13A4Q9UKG4 626 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 DNMT3AQ9Y6K1 912 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PGRMC2O15173 223 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 TXNL1O43396 289 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CXCL10P02778 98 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RAF1P04049 648 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 FABP1P07148 127 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 STSP08842 583 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ITGB6P18564 788 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CSKP41240 450 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PSMD4P55036 377 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM189BP81408 668 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 IQCCQ4KMZ1 466 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RNASE12Q5GAN4 147 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 BCL2L15Q5TBC7 163 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SHEQ5VZ18 495 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC16A12Q6ZSM3 486 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SSX6Q7RTT6 188 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RNF130Q86XS8 419 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZMIZ2Q8NF64 920 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 OR6M1Q8NGM8 313 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 NANPQ8TBE9 248 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CYB5D2Q8WUJ1 264 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC35F5Q8WV83 523 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 TCTEX1D2Q8WW35 142 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 UFD1Q92890 307 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZDHHC12Q96GR4 267 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PPP3R2Q96LZ3 170 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF300Q96RE9 604 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 C11orf54Q9H0W9 315 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SDHAF2Q9NX18 166 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 COMMD9Q9P000 198 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PTGFRNQ9P2B2 879 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 VWA7Q9Y334 891 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 NME7Q9Y5B8 376 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PSME4Q14997 1843 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CDH23Q9H251 3354 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 C5orf58C9J3I9 102 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF195O14628 629 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RAMP2O60895 175 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PAPSS2O95340 614 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 AP2A1O95782 977 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 C1RP00736 705 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 HAPLN1P10915 354 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 DCTP40126 519 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PPP3R1P63098 170 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RPP38P78345 283 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 BAK1Q16611 211 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PROX2Q3B8N5 592 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 COQ5Q5HYK3 327 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RETSATQ6NUM9 610 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM81Q6P7N7 255 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SERPINA13PQ6UXR4 307 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF621Q6ZSS3 439 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 GPRIN3Q6ZVF9 776 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 HS3ST5Q8IZT8 346 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 DEFB119Q8N690 84 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF614Q8N883 585 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 OR4D10Q8NGI6 311 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 GATAD2BQ8WXI9 593 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 BTN2A3PQ96KV6 586 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 C10orf90Q96M02 699 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 KCNC2Q96PR1 638 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 GPR63Q9BZJ6 419 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ABCG5Q9H222 651 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 MTG2Q9H4K7 406 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PRDM6Q9NQX0 595 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 GIMAP2Q9UG22 337 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 PLXNB2O15031 1838 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 A0A1W2PQL4 384 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC28A1O00337 649 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 COCHO43405 550 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RGS14O43566 566 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 MITFO75030 526 aaPredicted RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 ARSBP15848 533 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CAPN3P20807 821 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 CD9P21926 228 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 MEOX2P50222 304 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 DNAJB13P59910 316 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SPIBQ01892 262 aa6.54□□□□□ -1.36
TGFBR3-209ENST00000532540 SPDYE7PQ495Y7 208 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms