RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PDLIM5Q96HC4 596 aaKnown RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 EGFL8Q99944 293 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 DEFB127Q9H1M4 99 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 NPDC1Q9NQX5 325 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 DEPPQ9NTK1 212 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 KCMF1Q9P0J7 381 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 MMACHCQ9Y4U1 282 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 CLDN16Q9Y5I7 305 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 PSAT1Q9Y617 370 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 KCNE2Q9Y6J6 123 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 HRNRQ86YZ3 2850 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 PINLYPA6NC86 204 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 GDF5P43026 501 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 SSR4P51571 173 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 CLNKQ7Z7G1 428 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 FAM47BQ8NA70 645 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 CCT6BQ92526 530 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 UCK2Q9BZX2 261 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 PRTFDC1Q9NRG1 225 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 RNF6Q9Y252 685 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 AKAP6Q13023 2319 aa17.15■□□□□ 0.34
SSSCA1-206ENST00000531405 A0A0G2JMM0 328 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 MYOCOSA0A1B0GUC4 107 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 A0A1W2PPB8 328 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 A0A1W2PRS3 328 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 TMEM200CA6NKL6 621 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 KIR3DP1A8MWS1 328 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 ERI3O43414 337 aaKnown RBP17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 WDR47O94967 919 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 GPR143P51810 404 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 STXBP1P61764 594 aaKnown RBP17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 SLC13A2Q13183 592 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 TERF2Q15554 542 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 EMC4Q5J8M3 183 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 CCDC71Q8IV32 467 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 SLC35F6Q8N357 371 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 MS4A6EQ96DS6 147 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 FAR2Q96K12 515 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 CCDC77Q9BR77 488 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 TIMMDC1Q9NPL8 285 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 PLSCR2Q9NRY7 297 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 PPIEQ9UNP9 301 aaKnown RBP17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 ERVK-11Q9UQG0 969 aa17.14■□□□□ 0.33
SSSCA1-206ENST00000531405 NINQ8N4C6 2090 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 LRIT2A6NDA9 550 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 FAM166BA8MTA8 275 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 FANCGO15287 622 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 OR2J2O76002 312 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TUBB4AP04350 444 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 C1GALT1C1LP0DN25 315 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 IGFBP2P18065 325 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 IVDP26440 423 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 RAB38P57729 211 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TFF3Q07654 80 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 SLBPQ14493 270 aaKnown RBP eCLIP17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TSNQ15631 228 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 XKR6Q5GH73 641 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 STEAP4Q687X5 459 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TMEM211Q6ICI0 200 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 ADNP2Q6IQ32 1131 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 IL20RBQ6UXL0 311 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 SPNS3Q6ZMD2 512 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 SLCO4C1Q6ZQN7 724 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 KLHDC8AQ8IYD2 350 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 PSD4Q8NDX1 1056 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 ANKRD49Q8WVL7 239 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 CSF3RQ99062 836 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TP63Q9H3D4 680 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 OARD1Q9Y530 152 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 TEX264Q9Y6I9 313 aa17.13■□□□□ 0.33
SSSCA1-206ENST00000531405 FAM95CA0A1B0GW59 222 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NCF1BA6NI72 391 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 USP27XA6NNY8 438 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 A8MVJ9 347 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NCF1CA8MVU1 366 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 G3V3Y1 287 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ZFAND5O76080 213 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 TOXO94900 526 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 OR6B1O95007 311 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 TBX6O95947 436 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NCF1P14598 390 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 GNAZP19086 355 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 CHRNB4P30926 498 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 SOX3P41225 446 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 PLA2G16P53816 162 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 HSD17B7P56937 341 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 PPIAP62937 165 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 TMIGD1Q6UXZ0 262 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 FRA10AC1Q70Z53 315 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ANKMY2Q8IV38 441 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 LILRB4Q8NHJ6 448 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ASB15Q8WXK1 588 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 RND1Q92730 232 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms