RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TMEM184CQ9NVA4 438 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 PAK5Q9P286 719 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 RNF6Q9Y252 685 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CAPN7Q9Y6W3 813 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 C4orf51C9J302 202 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 ANKRD65E5RJM6 399 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 H0YHG0 523 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 TSPAN12O95859 305 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 OGNP20774 298 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 MSX1P28360 303 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 DNAJA1P31689 397 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 PHBP35232 272 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 HSD17B2P37059 387 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 NPY2RP49146 381 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 VPS41P49754 854 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 MLF1P58340 268 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 RPS15AP62244 130 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 BTG2P78543 158 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 BASP1P80723 227 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 RNF187Q5TA31 235 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 MRNIPQ6NTE8 343 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 RGS9BPQ6ZS82 235 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 Q71RC1 249 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 MDGA2Q7Z553 956 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 CD163Q86VB7 1156 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 RPS19BP1Q86WX3 136 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 SULF2Q8IWU5 870 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 CPNE9Q8IYJ1 553 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 LRRC34Q8IZ02 419 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC5A8Q8N695 610 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 GBP7Q8N8V2 638 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF740Q8NDX6 193 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 NFAM1Q8NET5 270 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 UHMK1Q8TAS1 419 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 DYDC1Q8WWB3 177 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 CCT6BQ92526 530 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 MAGEB18Q96M61 343 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 TCF12Q99081 682 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 LPAR4Q99677 370 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 SPNS1Q9H2V7 528 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 NKIRAS1Q9NYS0 192 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 BFARQ9NZS9 450 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF223Q9UK11 482 aaPredicted RBP8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC12A4Q9UP95 1085 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 EXPH5Q8NEV8 1989 aa8.6□□□□□ -1.03
CHMP4A-205ENST00000531158 FN1P02751 2386 aaKnown RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 TLN2Q9Y4G6 2542 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 NINQ8N4C6 2090 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 IGKV3D-11A0A0A0MRZ8 115 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 ZCWPW2A0A1B0GU75 182 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 EXOC1LA0A1B0GW35 172 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 PINLYPA6NC86 204 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 CCT8L1PA6NM43 557 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 FAM90A27PA6NNH2 459 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 E5RI56 91 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 E7ESA3 106 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 H3BMM5 538 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 PRRG2O14669 202 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 HS6ST1O60243 411 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 SNX3O60493 162 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 GALR3O60755 368 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 TPOP07202 933 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 FHP07954 510 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 MPC1LP0DKB6 136 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 MAOAP21397 527 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 TRHRP34981 398 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 PTGS2P35354 604 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 MEOX1P50221 254 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 IST1P53990 364 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 OR4D2P58180 307 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 MEF2AQ02078 507 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 GPS1Q13098 491 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 CTBP1Q13363 440 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 PHKG1Q16816 387 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 THEMIS2Q5TEJ8 643 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 ANKRD22Q5VYY1 191 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF470Q6ECI4 717 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 NEPROQ6NW34 567 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 SDCCAG8Q86SQ7 713 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 ASPGQ86U10 573 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 TRABD2AQ86V40 505 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 CAND1Q86VP6 1230 aaKnown RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 CCDC71Q8IV32 467 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 DMRTC2Q8IXT2 367 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 APCDD1LQ8NCL9 501 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 CHDHQ8NE62 594 aaPredicted RBP8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 OR52N2Q8NGI0 321 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 C16orf52Q8NHV5 167 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC13A3Q8WWT9 602 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 KCNJ9Q92806 393 aa8.59□□□□□ -1.03
CHMP4A-205ENST00000531158 OR1F2PQ96R84 312 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms