RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CDNFQ49AH0 187 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 TMPRSS11BQ86T26 416 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 RASGRP3Q8IV61 690 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 COX18Q8N8Q8 333 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 TSTD1Q8NFU3 115 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CPT1BQ92523 772 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 RSC1A1Q92681 617 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PTCHD1Q96NR3 888 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 URM1Q9BTM9 101 aaKnown RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 ACTRT3Q9BYD9 372 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ZDHHC4Q9NPG8 344 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 DUSP22Q9NRW4 184 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 MAN2C1Q9NTJ4 1040 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 SLC17A7Q9P2U7 560 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 BRWD3Q6RI45 1802 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CPED1A4D0V7 1026 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 FAM86B1E9PN63 330 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 IMPA2O14732 288 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PPP1R2P9O14990 202 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ALOX15BO15296 676 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 STK16O75716 305 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 SPDEFO95238 335 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PRPH2P23942 346 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 LSSP48449 732 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CX3CR1P49238 355 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 AKR1C2P52895 323 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 TAS2R30P59541 319 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PMPCAQ10713 525 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 TMEM205Q6UW68 189 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 C19orf35Q6ZS72 473 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PXKQ7Z7A4 578 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ANKRD13BQ86YJ7 626 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 FITM2Q8N6M3 262 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 DBF4BQ8NFT6 615 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 OR13C3Q8NGS6 347 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 RAB39BQ96DA2 213 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 RBM18Q96H35 190 aaKnown RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 SYT3Q9BQG1 590 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 MIOSQ9NXC5 875 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ALKBH4Q9NXW9 302 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 COL20A1Q9P218 1284 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 AK6Q9Y3D8 172 aaKnown RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 NPIPA2E9PIF3 369 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 NPIPA5E9PKD4 350 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 NPIPA3F8WFD2 350 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CDC7O00311 574 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 AGPAT2O15120 278 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 PRKYO43930 277 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 OXSR1O95747 527 aaPredicted RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 TXNDC12O95881 172 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 MAKP20794 623 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 DGKGP49619 791 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 AIF1P55008 147 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 VSX2P58304 361 aaPredicted RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 GCNT1Q02742 428 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CTBP1Q13363 440 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ARHGAP11BQ3KRB8 267 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CLEC12AQ5QGZ9 265 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF852Q6ZMS4 543 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 SV2AQ7L0J3 742 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 SLC15A3Q8IY34 581 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF611Q8N823 705 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF527Q8NB42 609 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 MRPL38Q96DV4 380 aaKnown RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 CDKN2AIPNLQ96HQ2 116 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 LRFN5Q96NI6 719 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 KCNC2Q96PR1 638 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF416Q9BWM5 594 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 GHRLQ9UBU3 117 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 LAMP5Q9UJQ1 280 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 CNOT11Q9UKZ1 510 aaKnown RBP7□□□□□ -1.29
CTNND1-229ENST00000531014 NPIPA1Q9UND3 350 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 SCML2Q9UQR0 700 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 NFASCO94856 1347 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
CTNND1-229ENST00000531014 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 MTMR11A4FU01 709 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 H7C1Q1 480 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SCAMP3O14828 347 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HEXBP07686 556 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 TPT1P13693 172 aaKnown RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 AQP2P41181 271 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 ASPAP45381 313 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 THBS3P49746 956 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HSD11B2P80365 405 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SHHQ15465 462 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 DPY19L1Q2PZI1 675 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 AVPI1Q5T686 147 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SMYD5Q6GMV2 418 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 FIGNL1Q6PIW4 674 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 BAGE2Q86Y30 109 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 C7orf57Q8NEG2 295 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.99□□□□□ -1.295e-8■■■■□ 23.2
CTNND1-229ENST00000531014 ELMOD3Q96FG2 381 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 AURKBQ96GD4 344 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-229ENST00000531014 HSFY1Q96LI6 401 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SPIN2AQ99865 258 aa6.99□□□□□ -1.29
CTNND1-229ENST00000531014 SPIN2BQ9BPZ2 258 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms