RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ATP6AP2A0A1C7CYW4 349 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 SLCO1B7G3V0H7 640 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 P2RX6O15547 441 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF821O75541 412 aaPredicted RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CPNE6O95741 557 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 GAS8O95995 478 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 IGHDP01880 384 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 HMBSP08397 361 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 PCP11498 1178 aaKnown RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 SKILP12757 684 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 FERP16591 822 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 UGT1A6P19224 532 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 IL10P22301 178 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 OR1D2P34982 312 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CCR4P51679 360 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 LUMP51884 338 aaPredicted RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CNN1P51911 297 aaKnown RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 HUNKP57058 714 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CEACAM7Q14002 265 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 TMEM187Q14656 261 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 TMEM132DQ14C87 1099 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 PDK1Q15118 436 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 NEK5Q6P3R8 708 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 B3GLCTQ6Y288 498 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 C17orf107Q6ZR85 190 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 C1orf186Q6ZWK4 172 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CATSPER4Q7RTX7 472 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 PTAR1Q7Z6K3 402 aaPredicted RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 KRTAP7-1Q8IUC3 87 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 CCDC185Q8N715 623 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 MRPL43Q8N983 215 aaKnown RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 DDHD1Q8NEL9 900 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 OR4D10Q8NGI6 311 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 SLC13A3Q8WWT9 602 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 SLC35C1Q96A29 364 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 BPIFA2Q96DR5 249 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 DTD2Q96FN9 168 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 PKNOX2Q96KN3 472 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 C2orf48Q96LS8 159 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 ASCL2Q99929 193 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 TEX13AQ9BXU3 409 aaPredicted RBP3.95□□□□□ -1.78
C11orf88-204ENST00000529661 LRRC2Q9BYS8 371 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 VIPAS39Q9H9C1 493 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 NINJ2Q9NZG7 142 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 EPHA6Q9UF33 1036 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 PILRAQ9UKJ1 303 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 ERVK-19Q9WJR5 959 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 SELENOKQ9Y6D0 94 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 MYH14Q7Z406 1995 aaKnown RBP3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CCDC162PA2VCL2 907 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SLC28A1O00337 649 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CPLX1O14810 134 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 PRPSAP2O60256 369 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 STBD1O95210 358 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 ALPPP05187 535 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 NUDT17P0C025 328 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 ALPPL2P10696 532 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 B4GALT1P15291 398 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 GJB2P29033 226 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 KIF5BP33176 963 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SLC1A3P43003 542 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 LBX1P52954 281 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 XGP55808 180 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CNTN1Q12860 1018 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 MSLNQ13421 630 aaPredicted RBP3.94□□□□□ -1.78
C11orf88-204ENST00000529661 GIT2Q14161 759 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 GAMTQ14353 236 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SPHARQ15513 63 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 TAB1Q15750 504 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 LRRC37A5PQ49AS3 106 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 RFPL4BQ6ZWI9 263 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 HOGA1Q86XE5 327 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 STHQ8IWL8 128 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 HDDC3Q8N4P3 179 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CCNYQ8ND76 341 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 TRPV3Q8NET8 790 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 OR52E1Q8NGJ3 308 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SPATA18Q8TC71 538 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 UBTD2Q8WUN7 234 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 OMA1Q96E52 524 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 FAM218AQ96MZ4 157 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF577Q9BSK1 485 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 NUSAP1Q9BXS6 441 aaKnown RBP3.94□□□□□ -1.78
C11orf88-204ENST00000529661 ABCG4Q9H172 646 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 ABCG8Q9H221 673 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CARD9Q9H257 536 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 HSD3B7Q9H2F3 369 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 FNDC4Q9H6D8 234 aaPredicted RBP3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SYTL2Q9HCH5 934 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 FGF22Q9HCT0 170 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 PIGVQ9NUD9 493 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 CACNG5Q9UF02 275 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 DNPEPQ9ULA0 475 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 SH3GLB1Q9Y371 365 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 UMODL1Q5DID0 1318 aa3.94□□□□□ -1.78
C11orf88-204ENST00000529661 FGD5Q6ZNL6 1462 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 RNF103-CHMP3A0A140T963 221 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 KRT87PA6NCN2 255 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 GLTPD2A6NH11 291 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 RNF103O00237 685 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms