RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 SLC22A9Q8IVM8 553 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 PLPP5Q8NEB5 264 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 AENQ8WTP8 325 aaKnown RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 TSLPQ969D9 159 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 RGMAQ96B86 450 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 CDK15Q96Q40 435 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 LPAR4Q99677 370 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 ERVK-6Q9BXR3 956 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 OR51B5Q9H339 312 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 DMRT3Q9NQL9 472 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 PRDM9Q9NQV7 894 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 LANCL2Q9NS86 450 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 TEKT2Q9UIF3 430 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 A0A1W2PPM1 405 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 A0A1W2PQ72 361 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 FAM227AF5H4B4 570 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 J3QKU1 62 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 OR7A17O14581 309 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 DNAJB6O75190 326 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 SUPT7LO94864 414 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 TUBBP07437 444 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 RPS17P08708 135 aaKnown RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 MYL2P10916 166 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 KRT4P19013 534 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 MAOAP21397 527 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 RAB38P57729 211 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 EXT1Q16394 746 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 SGO1Q5FBB7 561 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 CRB2Q5IJ48 1285 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 JMJD6Q6NYC1 403 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 QSOX2Q6ZRP7 698 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 LINC00696Q6ZRV3 163 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 L3MBTL4Q8NA19 623 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 OR52B6Q8NGF0 335 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 BRIX1Q8TDN6 353 aaKnown RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 TRPC4APQ8TEL6 797 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 CAVIN3Q969G5 261 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 MTFMTQ96DP5 389 aaKnown RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 CCDC126Q96EE4 140 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 NSUN5Q96P11 429 aaKnown RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 ZNF552Q9H707 407 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-215ENST00000528396 PRTFDC1Q9NRG1 225 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 PTGFRNQ9P2B2 879 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 GRID1Q9ULK0 1009 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 STK38LQ9Y2H1 464 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 NBASA2RRP1 2371 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 NUP210LQ5VU65 1888 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 PCSK5Q92824 1860 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
CAPN1-215ENST00000528396 TNRC6AQ8NDV7 1962 aaKnown RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CCDC151A5D8V7 595 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 A8MUI8 341 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 FOXO6A8MYZ6 492 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 RTCAO00442 366 aaKnown RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 DLX3O60479 287 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 NUDT17P0C025 328 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 TSPAN8P19075 237 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 HIST1H1TP22492 207 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 NEK2P51955 445 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CDH13P55290 713 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 LIM2P55344 173 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 HSD17B7P56937 341 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 RPS13P62277 151 aaKnown RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 TLE1Q04724 770 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 Q0VFX4 171 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 RUNX2Q13950 521 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 RASA2Q15283 850 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CFAP157Q5JU67 520 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 DEPDC1Q5TB30 811 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 FRG2Q64ET8 278 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 OR4C11Q6IEV9 310 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF595Q8IYB9 648 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 SHISA5Q8N114 240 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 RNF175Q8N4F7 328 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 SIRT6Q8N6T7 355 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CCNYL1Q8N7R7 359 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF483Q8TF39 744 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-215ENST00000528396 MZB1Q8WU39 189 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 CNDP1Q96KN2 507 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 QRFPRQ96P65 431 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 FRG2BQ96QU4 278 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 SERPINI1Q99574 410 aa12.58□□□□□ -0.4
CAPN1-215ENST00000528396 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms