RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FCHO1O14526 889 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 B3GALT2O43825 422 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ZG16O60844 167 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 NEURL1O76050 574 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 B3GALT4O96024 378 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CD1DP15813 335 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CA7P43166 264 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CYB561P49447 251 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CLCN2P51788 898 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 PLTPP55058 493 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 RAB10P61026 200 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 BTG2P78543 158 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ART3Q13508 389 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CASP8Q14790 479 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ZKSCAN8Q15776 578 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 TBCCQ15814 346 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 HIST2H2ACQ16777 129 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 C1QL3Q5VWW1 255 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 HIST2H2AA3Q6FI13 130 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 SPINK14Q6IE38 97 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 PDPRQ8NCN5 879 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 NFAM1Q8NET5 270 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 OR2L5Q8NG80 312 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 REXO4Q9GZR2 422 aaKnown RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 RHBGQ9H310 441 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 RUBCNLQ9H714 662 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 NECTIN3Q9NQS3 549 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 PTBP2Q9UKA9 531 aaKnown RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 PPIEQ9UNP9 301 aaKnown RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 ENTPD4Q9Y227 616 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 KLF2Q9Y5W3 355 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-212ENST00000527887 TRGV8A0A0C4DH27 118 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 NCF1BA6NI72 391 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 NCF1CA8MVU1 366 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 TAPBPO15533 448 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 S100BP04271 92 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 NCF1P14598 390 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 MAOAP21397 527 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 COL8A1P27658 744 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CRABP2P29373 138 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 STX2P32856 288 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CASP2P42575 452 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 RAB38P57729 211 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 MLF1P58340 268 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.288e-8■■■■□ 20.9
CAPN1-212ENST00000527887 TRADDQ15628 312 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 ZNF787Q6DD87 383 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CAPN12Q6ZSI9 719 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 TRMT10CQ7L0Y3 403 aaKnown RBP13.28□□□□□ -0.28
CAPN1-212ENST00000527887 SCUBE1Q8IWY4 988 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CTAGE3PQ8IX95 158 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 POGLUT1Q8NBL1 392 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 B3GNT7Q8NFL0 401 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 GPR137Q96N19 417 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 SERINC2Q96SA4 455 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 TMEM79Q9BSE2 394 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CAB39LQ9H9S4 337 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 NMRAL1Q9HBL8 299 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 KLHL1Q9NR64 748 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 CD274Q9NZQ7 290 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 RNF112Q9ULX5 631 aa13.28□□□□□ -0.28
CAPN1-212ENST00000527887 FAM227AF5H4B4 570 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 CCL21O00585 134 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 PHGDHO43175 533 aaKnown RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 HNRNPRO43390 633 aaKnown RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 SLC19A2O60779 497 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 SLC25A12O75746 678 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 SERPINB1P30740 379 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 HLCSP50747 726 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 MTTPP55157 894 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 GPX6P59796 221 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 RUNX2Q13950 521 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 E2F2Q14209 437 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 PDK4Q16654 411 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 XKR6Q5GH73 641 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
CAPN1-212ENST00000527887 Q6ZPB1 254 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-212ENST00000527887 LRRC70Q7Z2Q7 622 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms