RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 C1orf105O95561 183 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 ITGA2P17301 1181 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CBLP22681 906 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GTF2E2P29084 291 aaKnown RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CCR2P41597 374 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 RECQLP46063 649 aaPredicted RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PRIM2P49643 509 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 TPTEP56180 551 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GANABQ14697 944 aaKnown RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 EIF4HQ15056 248 aaKnown RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 FAM71E1Q6IPT2 247 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 DPPA4Q7L190 304 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF367Q7RTV3 350 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 LAS2Q8IYD9 372 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PARP16Q8N5Y8 322 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 POC5Q8NA72 575 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GTPBP3Q969Y2 492 aaKnown RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PPCDCQ96CD2 204 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CHCHD6Q9BRQ6 235 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 OR51B5Q9H339 312 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 MTG2Q9H4K7 406 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 MYNNQ9NPC7 610 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 FTSJ1Q9UET6 329 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GPC6Q9Y625 555 aaPredicted RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 TCF20Q9UGU0 1960 aaKnown RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 NOTCH4Q99466 2003 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 FOXE1O00358 373 aaPredicted RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 ARAFP10398 606 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 NPPBP16860 134 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 CA8P35219 290 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 CHI3L1P36222 383 aaPredicted RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 UGT2B15P54855 530 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 C2orf80Q0P641 193 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 TMEM115Q12893 351 aaPredicted RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF362Q5T0B9 420 aaPredicted RBP11.15□□□□□ -0.62
LINC01001-201ENST00000526704 IER5LQ5T953 404 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 TMEM220Q6QAJ8 160 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 SYTL1Q8IYJ3 562 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 NLGN4XQ8N0W4 816 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 CYB5D2Q8WUJ1 264 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 CRELD1Q96HD1 420 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 TXNDC15Q96J42 360 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 FOPNLQ96NB1 174 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 OR5M11Q96RB7 305 aa11.15□□□□□ -0.62
LINC01001-201ENST00000526704 CCNB2O95067 398 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TGFB1P01137 390 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 HSMCR30P0CW71 290 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 HMGA2P52926 109 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TAS2R50P59544 299 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 MEF2AQ02078 507 aaPredicted RBP11.15□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF45Q02386 682 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TSTA3Q13630 321 aaPredicted RBP11.15□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF630Q2M218 657 aaPredicted RBP11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TRIM40Q6P9F5 258 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 KLHL17Q6TDP4 642 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 MRGPRX3Q96LB0 322 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 WRAP53Q9BUR4 548 aaKnown RBP11.15□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF556Q9HAH1 456 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TAS2R9Q9NYW1 312 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 TSC22D4Q9Y3Q8 395 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.63
LINC01001-201ENST00000526704 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 TRBC2A0A5B9 178 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 ZAR1LA6NP61 321 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 FAM227AF5H4B4 570 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 H3BM21 787 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 GADD45GO95257 159 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 DLGAP3O95886 979 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 PTTG1O95997 202 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 C8AP07357 584 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 TYRP14679 529 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 LAG3P18627 525 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 S100A5P33763 92 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 SOAT1P35610 550 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 MMP12P39900 470 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 MAPK9P45984 424 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 CDC42P60953 191 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 OLR1P78380 273 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 CNKSR3Q6P9H4 555 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 C19orf48Q6RUI8 117 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 ATCAYQ86WG3 371 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 MMP21Q8N119 569 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 AQP11Q8NBQ7 271 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 FBXO15Q8NCQ5 510 aaPredicted RBP11.14□□□□□ -0.63
LINC01001-201ENST00000526704 SLAIN1Q8ND83 568 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 AP2M1Q96CW1 435 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 EFCAB11Q9BUY7 163 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 SGPP1Q9BX95 441 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 CDCA4Q9BXL8 241 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 ROGDIQ9GZN7 287 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 MIR1-1HGQ9H1L0 117 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01001-201ENST00000526704 HCFC1R1Q9NWW0 138 aa11.14□□□□□ -0.63
LINC01001-201ENST00000526704 RHCGQ9UBD6 479 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms