RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 TBL3Q12788 808 aaKnown RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 XKR7Q5GH72 579 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 MLIPQ5VWP3 458 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 FAM199XQ6PEV8 388 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 CYP20A1Q6UW02 462 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 LRRC69Q6ZNQ3 347 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 MED25Q71SY5 747 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 OR51Q1Q8NH59 317 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 MIEF2Q96C03 454 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 C19orf60Q96EN9 201 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 RNF31Q96EP0 1072 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ZNF717Q9BY31 904 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 DAPP1Q9UN19 280 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 TMED5Q9Y3A6 229 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 A0A0G2JN53 185 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 LOC101059948A0A1B0GTJ6 334 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ZNF860A6NHJ4 632 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 PIP5K1BO14986 540 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 GUCY1B2O75343 617 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 RECKO95980 971 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 PTPN4P29074 926 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 XCR1P46094 333 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 RAB38P57729 211 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 SLC9A5Q14940 896 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 TGIF1Q15583 401 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 NKG7Q16617 165 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 SPDYAQ5MJ70 313 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 BROXQ5VW32 411 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 GALNT18Q6P9A2 607 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ZNF793Q6ZN11 406 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 COMMD6Q7Z4G1 85 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 DTWD1Q8N5C7 304 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ENDOVQ8N8Q3 282 aaKnown RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 KDF1Q8NAX2 398 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 PPP3R2Q96LZ3 170 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 TUBB1Q9H4B7 451 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 ZNF395Q9H8N7 513 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 AKIRIN1Q9H9L7 192 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 HCN3Q9P1Z3 774 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 MCM8Q9UJA3 840 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 FARSAQ9Y285 508 aaKnown RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 A0A0A6YYD5 115 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 VSTM2BA6NLU5 285 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 TRPC5OSA6NMA1 111 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 RTCAO00442 366 aaKnown RBP17.68■□□□□ 0.42
PTPRK-218ENST00000525459 KLK10O43240 276 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CHST10O43529 356 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 SKAP2O75563 359 aaPredicted RBP17.68■□□□□ 0.42
PTPRK-218ENST00000525459 MYO1DO94832 1006 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 FOLR3P41439 243 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 UCNP55089 124 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 SNRPNP63162 240 aaKnown RBP17.68■□□□□ 0.42
PTPRK-218ENST00000525459 HMGCS1Q01581 520 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 MC1RQ01726 317 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 NR6A1Q15406 480 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 LCN10Q6JVE6 187 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 WDR75Q8IWA0 830 aaKnown RBP17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CA13Q8N1Q1 262 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 C7orf57Q8NEG2 295 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 OR2Y1Q8NGV0 311 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 STT3BQ8TCJ2 826 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CHTF18Q8WVB6 975 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 NACC2Q96BF6 587 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 TBC1D20Q96BZ9 403 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 SLC45A3Q96JT2 553 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CCNL2Q96S94 520 aaPredicted RBP17.68■□□□□ 0.42
PTPRK-218ENST00000525459 YIPF2Q9BWQ6 316 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CCDC134Q9H6E4 229 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 C1orf109Q9NX04 203 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CTSFQ9UBX1 484 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 TCFL5Q9UL49 500 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 CCL27Q9Y4X3 112 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 SCN2AQ99250 2005 aa17.68■□□□□ 0.42
PTPRK-218ENST00000525459 HDAC3O15379 428 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 VPS4BO75351 444 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 IGHEP01854 428 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 ZGLP1P0C6A0 271 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 BUD31P41223 144 aaPredicted RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 TRA2BP62995 288 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 TUBB8Q3ZCM7 444 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 CRTC2Q53ET0 693 aaPredicted RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 SCIMPQ6UWF3 145 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 ZC3H7AQ8IWR0 971 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 C1orf52Q8N6N3 182 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 SPSB2Q99619 263 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 IGF2RP11717 2491 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 BMP10O95393 424 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 FHP07954 510 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 LINC00032P0C843 101 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 LIFP15018 202 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 ACPPP15309 386 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 MAPK1P28482 360 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 TIA1P31483 386 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 MDH1P40925 334 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 LIM2P55344 173 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 MAT1AQ00266 395 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 MAD2L1Q13257 205 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms