RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 EXT2Q93063 718 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 MAGED4Q96JG8 741 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 GPR22Q99680 433 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 RBBP8Q99708 897 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 TRIM45Q9H8W5 580 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 CLK4Q9HAZ1 481 aaKnown RBP11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 PRTFDC1Q9NRG1 225 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 PNO1Q9NRX1 252 aaKnown RBP11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 ZNF490Q9ULM2 529 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 MMACHCQ9Y4U1 282 aa11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 KLF2Q9Y5W3 355 aaPredicted RBP11.03□□□□□ -0.64
CLNS1A-202ENST00000525064 TCRBV9S1A1TA0A576 114 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 TMEM200CA6NKL6 621 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 FAM159BA6NKW6 160 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 ASNA1O43681 348 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 ZNF24P17028 368 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 HTR1EP28566 365 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 PTGER1P34995 402 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 KCNC1P48547 511 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 CYB561P49447 251 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 MEOX1P50221 254 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 HLCSP50747 726 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 GPR143P51810 404 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 SLC12A2P55011 1212 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 POU4F1Q01851 419 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 DLG1Q12959 904 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 DOC2AQ14183 400 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 EFTUD2Q15029 972 aaKnown RBP eCLIP11.02□□□□□ -0.652e-6■■■□□ 17.4
CLNS1A-202ENST00000525064 ZKSCAN8Q15776 578 aaPredicted RBP11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.02□□□□□ -0.655e-10■■□□□ 12.5
CLNS1A-202ENST00000525064 ADPRMQ3LIE5 342 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 RPTNQ6XPR3 784 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 C3P1Q6ZMU1 363 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 ZNF793Q6ZN11 406 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 ARMC10Q8N2F6 343 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 HORMAD2Q8N7B1 307 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 SNX31Q8N9S9 440 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 PDPRQ8NCN5 879 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 B3GNT7Q8NFL0 401 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 PYROXD1Q8WU10 500 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 NCLNQ969V3 563 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 DEFB126Q9BYW3 111 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 LIN28AQ9H9Z2 209 aaKnown RBP11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 DNAJC11Q9NVH1 559 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 GPRC5BQ9NZH0 403 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 MEMO1Q9Y316 297 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 FREM3P0C091 2139 aa11.02□□□□□ -0.65
CLNS1A-202ENST00000525064 CYR61O00622 381 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ADAM10O14672 748 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 H2AFYO75367 372 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ITGA10O75578 1167 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 CLEC3AO75596 197 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ESRRAP11474 423 aaPredicted RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 GGT5P36269 586 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 GP5P40197 560 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 CLCN2P51788 898 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 LIM2P55344 173 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 GPR85P60893 370 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 TRADDQ15628 312 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ZNF630Q2M218 657 aaPredicted RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 KRTCAP3Q53RY4 240 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ABHD17CQ6PCB6 329 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 MDGA2Q7Z553 956 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 UBE3DQ7Z6J8 389 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 GPSM1Q86YR5 675 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 SULF2Q8IWU5 870 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 KRT78Q8N1N4 520 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 GHDCQ8N2G8 530 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ZNF321PQ8N8H1 164 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 FAM98AQ8NCA5 519 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ARMC2Q8NEN0 867 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 TTLQ8NG68 377 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 OR2L5Q8NG80 312 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 WDR34Q96EX3 536 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 FAR2Q96K12 515 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 F2RL3Q96RI0 385 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 CPNE1Q99829 537 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 ERP44Q9BS26 406 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 NPLQ9BXD5 320 aaPredicted RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 REXO4Q9GZR2 422 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 NT5DC2Q9H857 520 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 WHRNQ9P202 907 aa11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 PTBP2Q9UKA9 531 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 PPIEQ9UNP9 301 aaKnown RBP11.01□□□□□ -0.65
CLNS1A-202ENST00000525064 A0A0G2JMM0 328 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 A0A1W2PPB8 328 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 A0A1W2PRS3 328 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 PINLYPA6NC86 204 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 FAM187AA6NFU0 413 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 ANKDD1BA6NHY2 528 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 KIR3DP1A8MWS1 328 aa11□□□□□ -0.65
CLNS1A-202ENST00000525064 RTCAO00442 366 aaKnown RBP11□□□□□ -0.65
CLNS1A-202ENST00000525064 FCHO1O14526 889 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms