RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SNX15Q9NRS6 342 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 DMGDHQ9UI17 866 aaKnown RBP17.39■□□□□ 0.37
CAPN1-203ENST00000525013 MMACHCQ9Y4U1 282 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 IGKV3D-11A0A0A0MRZ8 115 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 SAGE2PA6NJ88 616 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 GABRR3A8MPY1 467 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 SYCE1LA8MT33 242 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 K7EPI3 171 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 CLDN4O14493 209 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ACSL3O95573 720 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 TBX6O95947 436 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 LDLRP01130 860 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 CRYABP02511 175 aaKnown RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 PCNAP12004 261 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 CERS1P27544 350 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 TYK2P29597 1187 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 CD96P40200 585 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 RAB38P57729 211 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 SRSF11Q05519 484 aaKnown RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 SLC13A2Q13183 592 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 TBCCQ15814 346 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ADPRMQ3LIE5 342 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ZNF324BQ6AW86 544 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ABHD17CQ6PCB6 329 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 RPS19BP1Q86WX3 136 aaKnown RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ELP5Q8TE02 316 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 UBE2E3Q969T4 207 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 QRFPRQ96P65 431 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 SERINC2Q96SA4 455 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ACSS3Q9H6R3 686 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 KLHL1Q9NR64 748 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 PNO1Q9NRX1 252 aaKnown RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 MRPS33Q9Y291 106 aaKnown RBP17.38■□□□□ 0.37
CAPN1-203ENST00000525013 ANGPTL3Q9Y5C1 460 aa17.38■□□□□ 0.37
CAPN1-203ENST00000525013 A0A096LPK6 155 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 HMX2A2RU54 273 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 SH3BGRLO75368 114 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 MYO1DO94832 1006 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 CTAGE8P0CG41 777 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 GFAPP14136 432 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 CD46P15529 392 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 EPB42P16452 691 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 CASP2P42575 452 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 SERPINB8P50452 374 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 MTTPP55157 894 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 PMP22Q01453 160 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 OR1C1Q15619 314 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 UBAP2Q5T6F2 1119 aaKnown RBP17.37■□□□□ 0.37
CAPN1-203ENST00000525013 HIST2H2BCQ6DN03 193 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 MED27Q6P2C8 311 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 KLC3Q6P597 504 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 CTAGE4Q8IX94 777 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 TEX9Q8N6V9 391 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 FAM47BQ8NA70 645 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 DNAJB8Q8NHS0 232 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 UBTD2Q8WUN7 234 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 SIGLEC12Q96PQ1 595 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 TSPYL1Q9H0U9 437 aa17.37■□□□□ 0.37
CAPN1-203ENST00000525013 LRRTM2O43300 516 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 MTHFD2P13995 350 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 HNRNPFP52597 415 aaKnown RBP17.36■□□□□ 0.37
CAPN1-203ENST00000525013 LIM2P55344 173 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 HSD17B7P56937 341 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 KCNK10P57789 538 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 RCN2Q14257 317 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 ACAP2Q15057 778 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 PFKFB4Q16877 469 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 C4orf17Q53FE4 359 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 GFRALQ6UXV0 394 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 CLNKQ7Z7G1 428 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 MYLK4Q86YV6 388 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-203ENST00000525013 SCUBE1Q8IWY4 988 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 LGI4Q8N135 537 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 HORMAD2Q8N7B1 307 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 TMEM52Q8NDY8 209 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 SRFBP1Q8NEF9 429 aaKnown RBP17.36■□□□□ 0.37
CAPN1-203ENST00000525013 NFAM1Q8NET5 270 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-203ENST00000525013 RHEBL1Q8TAI7 183 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 ADAMTS18Q8TE60 1221 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 KCNC2Q96PR1 638 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 FMO2Q99518 471 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 MS4A8Q9BY19 250 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 HES7Q9BYE0 225 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 DEFB126Q9BYW3 111 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 VPS11Q9H270 941 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 CDC42EP4Q9H3Q1 356 aaKnown RBP17.36■□□□□ 0.37
CAPN1-203ENST00000525013 PRDM7Q9NQW5 492 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 IKBKGQ9Y6K9 419 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 PCNX1Q96RV3 2341 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 NOTCH2Q04721 2471 aa17.36■□□□□ 0.37
CAPN1-203ENST00000525013 WIPF3A6NGB9 483 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 KLHL2O95198 593 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 TGFB1P01137 390 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 ALDOAP04075 364 aaKnown RBP17.35■□□□□ 0.37
CAPN1-203ENST00000525013 INHBAP08476 426 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 MST1P26927 711 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 EEF1DP29692 281 aaKnown RBP17.35■□□□□ 0.37
CAPN1-203ENST00000525013 TDGF1P3P51864 188 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 DDX39BQ13838 428 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms