RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 XKR6Q5GH73 641 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 CLNKQ7Z7G1 428 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 THOC6Q86W42 341 aaKnown RBP24.11■■□□□ 1.45
PVT1-219ENST00000523427 CLYBLQ8N0X4 340 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 CCT6BQ92526 530 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 SMIM10Q96HG1 83 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 FAR2Q96K12 515 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 AICDAQ9GZX7 198 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 CLK4Q9HAZ1 481 aaKnown RBP24.11■■□□□ 1.45
PVT1-219ENST00000523427 YARS2Q9Y2Z4 477 aaKnown RBP24.11■■□□□ 1.45
PVT1-219ENST00000523427 MMACHCQ9Y4U1 282 aa24.11■■□□□ 1.45
PVT1-219ENST00000523427 ACOT7O00154 380 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 WWP2O00308 870 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 OR6B1O95007 311 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 PGAM1P18669 254 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 BMPR2Q13873 1038 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 SNTB1Q13884 538 aaKnown RBP24.1■■□□□ 1.45
PVT1-219ENST00000523427 RUNX2Q13950 521 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 NXPE4Q6UWF7 544 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 OR2M7Q8NG81 312 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 MS4A14Q96JA4 679 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 SMC6Q96SB8 1091 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 PPANQ9NQ55 473 aaKnown RBP24.1■■□□□ 1.45
PVT1-219ENST00000523427 DNAJB12Q9NXW2 375 aaKnown RBP24.1■■□□□ 1.45
PVT1-219ENST00000523427 IKZF3Q9UKT9 509 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 SLC22A14Q9Y267 594 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 LIPGQ9Y5X9 500 aa24.1■■□□□ 1.45
PVT1-219ENST00000523427 TGFBR3LH3BV60 316 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 HNRNPFP52597 415 aaKnown RBP24.09■■□□□ 1.45
PVT1-219ENST00000523427 ZNF750Q32MQ0 723 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 KIAA0408Q6ZU52 694 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 NAT8LQ8N9F0 302 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 FAM47BQ8NA70 645 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 TMUB1Q9BVT8 246 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 PELI2Q9HAT8 420 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 CCM2LQ9NUG4 571 aaPredicted RBP24.09■■□□□ 1.45
PVT1-219ENST00000523427 ALKBH4Q9NXW9 302 aa24.09■■□□□ 1.45
PVT1-219ENST00000523427 NIPBLQ6KC79 2804 aaeCLIP24.08■■□□□ 1.45
PVT1-219ENST00000523427 NRDCO43847 1150 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 KLK8O60259 260 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 IFNA16P05015 189 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 SERPINA6P08185 405 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 ACVR2AP27037 513 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 SOX3P41225 446 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 CCDC137Q6PK04 289 aaKnown RBP24.08■■□□□ 1.45
PVT1-219ENST00000523427 TMEM52Q8NDY8 209 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 GABPB2Q8TAK5 448 aaPredicted RBP24.08■■□□□ 1.45
PVT1-219ENST00000523427 CREB3L4Q8TEY5 395 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 PWWP2AQ96N64 755 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 TTTY12Q9BZ98 90 aa24.08■■□□□ 1.45
PVT1-219ENST00000523427 ABCA4P78363 2273 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 CLDN4O14493 209 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 CCDC175P0C221 793 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 GPR143P51810 404 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 CCZ1BP86790 482 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 CCZ1P86791 482 aaPredicted RBP24.07■■□□□ 1.44
PVT1-219ENST00000523427 TERF2Q15554 542 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 SLC22A16Q86VW1 577 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 GAS2L3Q86XJ1 694 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 SCUBE1Q8IWY4 988 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 ZZZ3Q8IYH5 903 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 TRIM58Q8NG06 486 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 EGFL8Q99944 293 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 TTYH2Q9BSA4 534 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 LIME1Q9H400 295 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 KCNE2Q9Y6J6 123 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 ACANP16112 2415 aa24.07■■□□□ 1.44
PVT1-219ENST00000523427 TMEM200CA6NKL6 621 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 GOLGA6L6A8MZA4 724 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 ERI3O43414 337 aaKnown RBP24.06■■□□□ 1.44
PVT1-219ENST00000523427 GLI4P10075 376 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 MAGEA5P43359 124 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 ZFP36L2P47974 494 aaKnown RBP24.06■■□□□ 1.44
PVT1-219ENST00000523427 DLX5P56178 289 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 STXBP1P61764 594 aaKnown RBP24.06■■□□□ 1.44
PVT1-219ENST00000523427 B3GNT6Q6ZMB0 384 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 PPIL6Q8IXY8 311 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.06■■□□□ 1.44
PVT1-219ENST00000523427 RASL10BQ96S79 203 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 MYOTQ9UBF9 498 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 ACAD8Q9UKU7 415 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 VWA7Q9Y334 891 aa24.06■■□□□ 1.44
PVT1-219ENST00000523427 PHF3Q92576 2039 aaKnown RBP24.05■■□□□ 1.44
PVT1-219ENST00000523427 ATP6AP2A0A1C7CYW4 349 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 FIGNL2A6NMB9 653 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 ATP6AP2O75787 350 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 CDC25BP30305 580 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 PLA2G16P53816 162 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 PPP2R2AP63151 447 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 FOLH1Q04609 750 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 CEBPEQ15744 281 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 HP1BP3Q5SSJ5 553 aaPredicted RBP24.05■■□□□ 1.44
PVT1-219ENST00000523427 SBSNQ6UWP8 590 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 LIX1LQ8IVB5 337 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 TMEM251Q8N6I4 163 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 GAL3ST3Q96A11 431 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 POLDIP3Q9BY77 421 aaKnown RBP24.05■■□□□ 1.44
PVT1-219ENST00000523427 LDAHQ9H6V9 325 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 EXO5Q9H790 373 aa24.05■■□□□ 1.44
PVT1-219ENST00000523427 ZDHHC11Q9H8X9 412 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms