RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZNF10P21506 573 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TNFSF10P50591 281 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 HNRNPFP52597 415 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 MTTPP55157 894 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 RAB38P57729 211 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 SLC26A5P58743 744 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 ZNF33BQ06732 778 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 MRPL49Q13405 166 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 FCRLBQ6BAA4 426 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 GRHL2Q6ISB3 625 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TMEM52Q8NDY8 209 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TXLNGYQ9BZA5 131 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 SLC29A3Q9BZD2 475 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 RNF32Q9H0A6 362 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TEKT2Q9UIF3 430 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 MMACHCQ9Y4U1 282 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TNPO3Q9Y5L0 923 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 ESPL1Q14674 2120 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 SH3BGRLO75368 114 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 CBX6O95503 412 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 SNRPAP09012 282 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 CERS1P27544 350 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 LIM2P55344 173 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 TGM3Q08188 693 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 GTF2H2Q13888 395 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 NR6A1Q15406 480 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 RPUSD3Q6P087 351 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 GTF2H2CQ6P1K8 395 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 GOLGA7Q7Z5G4 137 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 RNF175Q8N4F7 328 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 PTGR2Q8N8N7 351 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 SRFBP1Q8NEF9 429 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 ELP5Q8TE02 316 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 SCYL1Q96KG9 808 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 ZNF354BQ96LW1 612 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 NPAS2Q99743 824 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■■■■ 27.4
TRAPPC9-211ENST00000521700 IPPKQ9H8X2 491 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 COPS7BQ9H9Q2 264 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 PRTFDC1Q9NRG1 225 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 XPR1Q9UBH6 696 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 DAPP1Q9UN19 280 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 CLDN16Q9Y5I7 305 aa16.76■□□□□ 0.27
TRAPPC9-211ENST00000521700 TRAV17A0A0B4J275 112 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 A8MUA0 341 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 RTCAO00442 366 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 CYR61O00622 381 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 E2F3O00716 465 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 SLC29A2Q14542 456 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 TSNAXIP1Q2TAA8 658 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 EIF2S3LQ2VIR3 472 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 TMEM35AQ53FP2 167 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 ACER2Q5QJU3 275 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 DEPDC1Q5TB30 811 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 LGSNQ5TDP6 509 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 LIPJQ5W064 366 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 METTL2BQ6P1Q9 378 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 ADGRD1Q6QNK2 874 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 ZNF793Q6ZN11 406 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 CHSY3Q70JA7 882 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 MYLK4Q86YV6 388 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 SCUBE1Q8IWY4 988 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 BEST3Q8N1M1 668 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 FAM26EQ8N5C1 309 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 FAM47BQ8NA70 645 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 ARMC2Q8NEN0 867 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 NFAM1Q8NET5 270 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 HUS1BQ8NHY5 278 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 GRHL3Q8TE85 626 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 PHF21BQ96EK2 531 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 CMTM7Q96FZ5 175 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 KCNC2Q96PR1 638 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 TBCDQ9BTW9 1192 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 EPB41L4BQ9H329 900 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 ACTR8Q9H981 624 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 AGPAT4Q9NRZ5 378 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 KCMF1Q9P0J7 381 aa16.75■□□□□ 0.27
TRAPPC9-211ENST00000521700 OR5H15A6NDH6 313 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 SAGE2PA6NJ88 616 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 SAP18O00422 153 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 CLDN4O14493 209 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 MAN1A2O60476 641 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 ATP5A1P25705 553 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 EEF1DP29692 281 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 SERPINB1P30740 379 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 PIK3CGP48736 1102 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 HSD17B7P56937 341 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 DDX39BQ13838 428 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 MEP1AQ16819 746 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 KHDRBS2Q5VWX1 349 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 TIFABQ6ZNK6 161 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 ZNF595Q8IYB9 648 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 GSPT2Q8IYD1 628 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 TMEM151AQ8N4L1 468 aa16.74■□□□□ 0.27
TRAPPC9-211ENST00000521700 KIF2BQ8N4N8 673 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms