RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 INPP5KQ9BT40 448 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 SGPP1Q9BX95 441 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 GABARAPL3Q9BY60 117 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 REXO4Q9GZR2 422 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 MCOLN1Q9GZU1 580 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ING2Q9H160 280 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 FAM83DQ9H4H8 585 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 LIN28AQ9H9Z2 209 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 SMURF2Q9HAU4 748 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZFP14Q9HCL3 533 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ASAH2Q9NR71 780 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 AASDHPPTQ9NRN7 309 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 GIN1Q9NXP7 522 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 VNN3Q9NY84 501 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 TBC1D14Q9P2M4 693 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 RABL2AQ9UBK7 228 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 VPS29Q9UBQ0 182 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ATP6V1HQ9UI12 483 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ENPP5Q9UJA9 477 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 FBXO9Q9UK97 447 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 UTS2RQ9UKP6 389 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 NDRG4Q9ULP0 352 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 PADI2Q9Y2J8 665 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 FAM32AQ9Y421 112 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 CENPFP49454 3210 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 A0A1W2PPW3 197 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ARRDC5A6NEK1 342 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 MAGEB17A8MXT2 336 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CENPBD1B2RD01 187 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CLIC1O00299 241 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CACNB4O00305 520 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 FPGTO14772 594 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 BCKDKO14874 412 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 KIAA0355O15063 1070 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 NOBOXO60393 691 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 FGF18O76093 207 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SEC24DO94855 1032 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 MT-ND1P03886 318 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CATP04040 527 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 FABP3P05413 133 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 UGT2B4P06133 528 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CISD3P0C7P0 127 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PCNAP12004 261 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 HOXA5P20719 270 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 IGFBP5P24593 272 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 IMPA1P29218 277 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CD6P30203 668 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 RPL3P39023 403 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 MMP12P39900 470 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CCR2P41597 374 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CLK3P49761 638 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 ENTPD1P49961 510 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 DAPP51397 102 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 MVDP53602 400 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PLA2G16P53816 162 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC35A2P78381 396 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 DEFB103AP81534 67 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 IRF8Q02556 426 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 FOXD4Q12950 439 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 FADDQ13158 208 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CHIT1Q13231 466 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC14A1Q13336 389 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 DOC2AQ14183 400 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 GAB4Q2WGN9 574 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZIK1Q3SY52 487 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 TRIM60Q495X7 471 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZNF805Q5CZA5 627 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 HABP4Q5JVS0 413 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 SPOUT1Q5T280 376 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TUBA3EQ6PEY2 450 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 KLHL35Q6PF15 583 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SPESP1Q6UW49 350 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SERPINA13PQ6UXR4 307 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC16A12Q6ZSM3 486 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 RFLNAQ6ZTI6 216 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 HSD11B1LQ7Z5J1 315 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 DEFB128Q7Z7B8 93 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TSPYL5Q86VY4 417 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 CYP4Z1Q86W10 505 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 THOC6Q86W42 341 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC30A8Q8IWU4 369 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 OXR1Q8N573 874 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 KREMEN2Q8NCW0 462 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZNF296Q8WUU4 475 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 FAR1Q8WVX9 515 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 IPCEF1Q8WWN9 437 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 ELMO1Q92556 727 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 GLYATL1Q969I3 302 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 REPS1Q96D71 796 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 MTERF3Q96E29 417 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 YIPF6Q96EC8 236 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PPP1R16AQ96I34 528 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 C7orf34Q96L11 122 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 C20orf173Q96LM9 149 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms