RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 QSOX2Q6ZRP7 698 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 SH2D5Q6ZV89 423 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 ZADH2Q8N4Q0 377 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CISD2Q8N5K1 135 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CPT1CQ8TCG5 803 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 EPS8L3Q8TE67 593 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MTFMTQ96DP5 389 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 FAR2Q96K12 515 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MAGEB10Q96LZ2 347 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MAPKAP1Q9BPZ7 522 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 TUBB6Q9BUF5 446 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MRPL46Q9H2W6 279 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 SEMA4BQ9NPR2 832 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 DMRT3Q9NQL9 472 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 KCMF1Q9P0J7 381 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF225Q9UK10 706 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 EMCNQ9ULC0 261 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 B3GNT3Q9Y2A9 372 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 TCRBV16S1A1N1A0A5B0 115 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 A8MUI8 341 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 STX16O14662 325 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 B3GALT2O43825 422 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 DLX3O60479 287 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 IL10P22301 178 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 GSTM2P28161 218 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 MTTPP55157 894 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 RAB38P57729 211 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SLC26A5P58743 744 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 IRAK1BP1Q5VVH5 260 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 LIPJQ5W064 366 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 PLAG1Q6DJT9 500 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SCUBE1Q8IWY4 988 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 DNAJB14Q8TBM8 379 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 WDR20Q8TBZ3 569 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF483Q8TF39 744 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 UCN3Q969E3 161 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SNRNP40Q96DI7 357 aaKnown RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SEC16BQ96JE7 1060 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 VPS50Q96JG6 964 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SERINC2Q96SA4 455 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF717Q9BY31 904 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 SLAMF7Q9NQ25 335 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 PRTFDC1Q9NRG1 225 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 ASF1BQ9NVP2 202 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 C19orf25Q9UFG5 118 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-219ENST00000518824 FETUBQ9UGM5 382 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 PCDHGA10Q9Y5H3 936 aa12.48□□□□□ -0.41
VEGFA-219ENST00000518824 RELNP78509 3460 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 WASHC1A8K0Z3 465 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PSMD12O00232 456 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PLPP1O14494 284 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PCDH17O14917 1159 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 SMIM24O75264 130 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 WDPCPO95876 746 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 CYC1P08574 325 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 JAK1P23458 1154 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 HSD17B3P37058 310 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 SKP1P63208 163 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 ID2Q02363 134 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 KCNC4Q03721 635 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.411e-7■■□□□ 13.4
VEGFA-219ENST00000518824 ACTN3Q08043 901 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 UNC50Q53HI1 259 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 KHDRBS2Q5VWX1 349 aaKnown RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 NIPAL1Q6NVV3 410 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 LETMD1Q6P1Q0 360 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 RIPOR1Q6ZS17 1223 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 ACOT4Q8N9L9 421 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 OR4F6Q8NGB9 312 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PPP4R1Q8TF05 950 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 UBE2E3Q969T4 207 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 TMEM237Q96Q45 408 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 LMF1Q96S06 567 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 NPLQ9BXD5 320 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 CLK4Q9HAZ1 481 aaKnown RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PRM3Q9NNZ6 103 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
VEGFA-219ENST00000518824 FARSBQ9NSD9 589 aaKnown RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 FBXW2Q9UKT8 454 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms