RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 NSUN5Q96P11 429 aaKnown RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 KCNC2Q96PR1 638 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 LPAR4Q99677 370 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 WDR77Q9BQA1 342 aaPredicted RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 TBCDQ9BTW9 1192 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 ILKAPQ9H0C8 392 aaPredicted RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 PRDM9Q9NQV7 894 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 PCTPQ9UKL6 214 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 B3GNT3Q9Y2A9 372 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 A8MT66 165 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 FOXO6A8MYZ6 492 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 H0YIV9 168 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 UGDHO60701 494 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 CLDN9O95484 217 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 PIK3CBP42338 1070 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 LIM2P55344 173 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 RAB38P57729 211 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 RPS13P62277 151 aaKnown RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 PHEXP78562 749 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 KCNC4Q03721 635 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 MFAP5Q13361 173 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 ZRSR2Q15696 482 aaKnown RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 AP5B1Q2VPB7 878 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 KHDRBS2Q5VWX1 349 aaKnown RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 B3GNTL1Q67FW5 361 aaPredicted RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 UBE3DQ7Z6J8 389 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 LCA5Q86VQ0 697 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 CNPY4Q8N129 248 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 L3MBTL4Q8NA19 623 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 FAM47BQ8NA70 645 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 ARMC2Q8NEN0 867 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 OR52B6Q8NGF0 335 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 DNAJB14Q8TBM8 379 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 CPT1CQ8TCG5 803 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 MZB1Q8WU39 189 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 MTFMTQ96DP5 389 aaKnown RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 CNDP1Q96KN2 507 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 LMF1Q96S06 567 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 ROGDIQ9GZN7 287 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 SEMA4BQ9NPR2 832 aaPredicted RBP17.54■□□□□ 0.4
FAM49B-208ENST00000518344 DMRT3Q9NQL9 472 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 MAP10Q9P2G4 905 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 PLAAQ9Y263 795 aa17.54■□□□□ 0.4
FAM49B-208ENST00000518344 A8MUA0 341 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 CLDN4O14493 209 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 SORBS2O94875 1100 aaKnown RBP17.53■□□□□ 0.4
FAM49B-208ENST00000518344 KRT15P19012 456 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 TSPAN8P19075 237 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 ATP5A1P25705 553 aaKnown RBP17.53■□□□□ 0.4
FAM49B-208ENST00000518344 HSD17B3P37058 310 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 SSR2P43308 183 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 NEK2P51955 445 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 RAP1GDS1P52306 607 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 SLC13A2Q13183 592 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 RCN2Q14257 317 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 DEPDC1Q5TB30 811 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 PLAG1Q6DJT9 500 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 TTC19Q6DKK2 380 aaPredicted RBP17.53■□□□□ 0.4
FAM49B-208ENST00000518344 IGFL2Q6UWQ7 119 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 Q6ZS92 163 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 EFCAB3Q8N7B9 438 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 ACOT4Q8N9L9 421 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 Q8NA96 180 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 PPP4R1Q8TF05 950 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 RGMAQ96B86 450 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 CENPKQ9BS16 269 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 SORBS1Q9BX66 1292 aaKnown RBP17.53■□□□□ 0.4
FAM49B-208ENST00000518344 KCNK13Q9HB14 408 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 ZBTB26Q9HCK0 441 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 NECTIN3Q9NQS3 549 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 PRTFDC1Q9NRG1 225 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 PLA2G3Q9NZ20 509 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 DCDC2Q9UHG0 476 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 DAPP1Q9UN19 280 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 MRPS33Q9Y291 106 aaKnown RBP17.53■□□□□ 0.4
FAM49B-208ENST00000518344 CSAG2Q9Y5P2 127 aa17.53■□□□□ 0.4
FAM49B-208ENST00000518344 GSTA1P08263 222 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 PTX3P26022 381 aaPredicted RBP17.52■□□□□ 0.4
FAM49B-208ENST00000518344 SOX11P35716 441 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 HNRNPFP52597 415 aaKnown RBP17.52■□□□□ 0.4
FAM49B-208ENST00000518344 CDH13P55290 713 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 FOXK1P85037 733 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 EXT1Q16394 746 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 ZNF793Q6ZN11 406 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 MILR1Q7Z6M3 343 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 TMEM52Q8NDY8 209 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 ADAMTS18Q8TE60 1221 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 EPS8L3Q8TE67 593 aaKnown RBP17.52■□□□□ 0.4
FAM49B-208ENST00000518344 NTMT1Q9BV86 223 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 PPCSQ9HAB8 311 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 TSC22D4Q9Y3Q8 395 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 MMACHCQ9Y4U1 282 aa17.52■□□□□ 0.4
FAM49B-208ENST00000518344 TCRBV16S1A1N1A0A5B0 115 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 TLDC2A0PJX2 215 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 DYTNA2CJ06 578 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 DLX3O60479 287 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 F10P00742 488 aa17.51■□□□□ 0.39
FAM49B-208ENST00000518344 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
FAM49B-208ENST00000518344 HIST1H1TP22492 207 aaPredicted RBP17.51■□□□□ 0.39
FAM49B-208ENST00000518344 ARG2P78540 354 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms