RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TEX44Q53QW1 395 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CGB2Q6NT52 195 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ERAP2Q6P179 960 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TUBA3EQ6PEY2 450 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L9Q6RFH8 374 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PLXDC2Q6UX71 529 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZDHHC24Q6UX98 284 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MFSD7Q6UXD7 560 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 GDPD4Q6W3E5 623 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM26Q6ZUK4 368 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ASRGL1Q7L266 308 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LUZP2Q86TE4 346 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TTC7BQ86TV6 843 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 RFX6Q8HWS3 928 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 KLHDC8BQ8IXV7 354 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC34Q8IZ02 419 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ARFGAP2Q8N6H7 521 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 NPWQ8N729 165 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CCDC197Q8NCU1 140 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CCNYQ8ND76 341 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 OR52N2Q8NGI0 321 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 OR1L3Q8NH93 324 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ACTRT1Q8TDG2 376 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CREB3L4Q8TEY5 395 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SMAP2Q8WU79 429 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TFB1MQ8WVM0 346 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ALG3Q92685 438 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 KRT35Q92764 455 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 UTP4Q969X6 686 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGOHBQ96A72 148 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC45Q96CN5 670 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZG16BQ96DA0 208 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SCRN2Q96FV2 425 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 IMP4Q96G21 291 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZC3HAV1LQ96H79 300 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 VPS50Q96JG6 964 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TEKT5Q96M29 485 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MCCC1Q96RQ3 725 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LYSMD1Q96S90 227 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MED18Q9BUE0 208 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM109Q9BVC6 243 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CINPQ9BW66 212 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ADGRE3Q9BY15 652 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 FRMD8Q9BZ67 464 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGEB5Q9BZ81 275 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 RAB33BQ9H082 229 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DEFB127Q9H1M4 99 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC25A51Q9H1U9 297 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CENPHQ9H3R5 247 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TRABDQ9H4I3 376 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SUV39H2Q9H5I1 410 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 EDA2RQ9HAV5 297 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MRM3Q9HC36 420 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PPANQ9NQ55 473 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 BATF3Q9NR55 127 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SERINC1Q9NRX5 453 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ETNK2Q9NVF9 386 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 RBM22Q9NW64 420 aaKnown RBP eCLIP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ETAA1Q9NY74 926 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 WHRNQ9P202 907 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ASH2LQ9UBL3 628 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DHCR7Q9UBM7 475 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LHX3Q9UBR4 397 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4Q9UBX2 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PRODH2Q9UF12 536 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TESQ9UGI8 421 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CORO1CQ9ULV4 474 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PACSIN2Q9UNF0 486 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DRG1Q9Y295 367 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 B3GALT5Q9Y2C3 310 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 AAR2Q9Y312 384 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 RNF114Q9Y508 228 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LOC285095A0A1B0GVY8 99 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 A0A1W2PP18 115 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM170AA1A519 330 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KRIT1O00522 736 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SNPHO15079 494 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TP73O15350 636 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF749O43361 778 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 AHCYL1O43865 530 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MFSD11O43934 449 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SNUPNO95149 360 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PGLSO95336 258 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ANP32DO95626 131 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PYGLP06737 847 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 FESP07332 822 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KRT16P08779 473 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 HBQ1P09105 142 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MYZAPP0CAP1 466 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 RBP3P10745 1247 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MYCLP1P12525 358 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CHN1P15882 459 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PTPN3P26045 913 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CEACAM8P31997 349 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CD96P40200 585 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PAFAH1B1P43034 410 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 DNA2P51530 1060 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 DCDP81605 110 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CDK16Q00536 496 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 DPTQ07507 201 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms